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The map label for this gene is 45657787

Identifier: 45657787

GI number: 45657787

Start: 2329668

End: 2331149

Strand: Reverse

Name: 45657787

Synonym: LIC11927

Alternate gene names: NA

Gene position: 2331149-2329668 (Counterclockwise)

Preceding gene: 45657788

Following gene: 45657786

Centisome position: 54.5

GC content: 32.39

Gene sequence:

>1482_bases
TTGGTGTTCGGTTTGAGTTCGTTTTTGACGGAAATTAAAAAAAATAAAGATCTCAAGATTTTTCTTTTTGTATTTACGTT
AGGCGCTTTTTTTAGACTTTTTCGTTTGGATTTACAAAGTCCTTGGGAAGACGAATTATTTTCTATCCGGGCTTCTTCTG
TAACCTCTTTAGGTGATCTTTGGAATTGGATGAAGGATGATCCTCATCCACCTTTGTATCAAACTCTTTTATATTTTTGG
TTTCAACTTTTACAGCCGACTGTTTTTGTAGGTAGGTTATTGAGTGCAATTTCCGGCCTTTTGGTACCGCTTGCGTTTTA
CATTTTTGCGCCTGTAGAACTCAAAGGAAGAATCAAAGTTTCCGTTTCTGCTTTATTAAGTTTATCTACGGGACTCATTT
ATTACTCCCAAGAATTAAGATCCTATAGTCTTTTAGTTTTGTTTTGTACGATTCAACTGGCTTTTGTTTTAAAACTAGTT
TATGAAAAAGAAAAAAATCCTAAATTATGTTTCAGTTTATTAGGAATTTCTTTATTAGCTTCTTATACTCATTTTTTTGG
ATTTATCTGGTCCGCTTCTATTTTTTTAGGAATGTTTATAGAAAAACTGATTTTTGAAAGGAAATTTTCTAAGGAGTTTT
TCTTTTTCGGAATTTCTTTTGGTTTGTTGTTTTTGCCAGTGCTTTATCTATTATTCAATTCGGATAAGATAGGAATCGCC
TCTTGGATACCGGAAGCTGGAACGACTGCGTTTATCGTATTTTTCGATTTGATCTTTCATTCCGGAATTCTAAAGAAGTT
TATTCCTGGAATTGTAGCTTCTGTGGCTTTGTTCGTGGGATTTGTTTCTATTTATTTTCAAAAAAGTTCTTCGGAAACGA
AAATGGAGGTATTGGATTTCGCTCATAAAAAATCTGTAATATTGTTTGGAATTGTTCTTACTATCTTTTCTATTGCACTT
TGTGTTCTTTCTTCAATTCAGCCATTGATTACAGCTAGGAATCTCTTGGTTACGGCGCCGGTTTTATACTTTTTGATTGC
AACTTTATTTTCTATTTTTCCGATTTATAAGGGAAGAAGGCTCGAATTTGTTCTCATTTTAATTTCTTTCGTATCGTTGT
ATTATTTTACTCGTTATTATTATAAACCGTACAAGGAACAGTGGAGAGAAAGTTCTCAGTATATTATTTCTACCGTTGTA
GGACACCCAAAAGATTTTACTCTTCTTTGTTCTTCTCATGCTTATAACATGGAATATTTTCTAAAGACTGCAAAGGTTAC
TGGGATTGTTCCTAGACTTTACACCAAAGAAGAAGTAAATCTTTTTATTCAAGATTCTTCTAAAAAGAATTTAGTGATTT
TAGAAACTTCTTGGAAGTATTTGAATTCTGAAGAATTGGAATCATTATTTATGCGTAGTAACTTTGATAGAAAAGATCAA
TTGTTTTACGGGATGAGAGTCGTCACGATTCGCAAAAAGTAA

Upstream 100 bases:

>100_bases
AAAAAAGAATTTGGAAACGTTTCATTCTTTAAAAAAGAAATTAGATCCAAAAGGAATTTTGGAAACAGATCTCTATAGAA
GAATTATGGGAATTTGGTAA

Downstream 100 bases:

>100_bases
ATTCCGGAATTTTAAACTATGAAAAAAAAGAATATCACCTATGTAATCCCGTGTTTGAACGAGGAAAAAACTCTTCCTCT
TGTTTTAGAAAAATTAGTTC

Product: cytoplasmic membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MVFGLSSFLTEIKKNKDLKIFLFVFTLGAFFRLFRLDLQSPWEDELFSIRASSVTSLGDLWNWMKDDPHPPLYQTLLYFW
FQLLQPTVFVGRLLSAISGLLVPLAFYIFAPVELKGRIKVSVSALLSLSTGLIYYSQELRSYSLLVLFCTIQLAFVLKLV
YEKEKNPKLCFSLLGISLLASYTHFFGFIWSASIFLGMFIEKLIFERKFSKEFFFFGISFGLLFLPVLYLLFNSDKIGIA
SWIPEAGTTAFIVFFDLIFHSGILKKFIPGIVASVALFVGFVSIYFQKSSSETKMEVLDFAHKKSVILFGIVLTIFSIAL
CVLSSIQPLITARNLLVTAPVLYFLIATLFSIFPIYKGRRLEFVLILISFVSLYYFTRYYYKPYKEQWRESSQYIISTVV
GHPKDFTLLCSSHAYNMEYFLKTAKVTGIVPRLYTKEEVNLFIQDSSKKNLVILETSWKYLNSEELESLFMRSNFDRKDQ
LFYGMRVVTIRKK

Sequences:

>Translated_493_residues
MVFGLSSFLTEIKKNKDLKIFLFVFTLGAFFRLFRLDLQSPWEDELFSIRASSVTSLGDLWNWMKDDPHPPLYQTLLYFW
FQLLQPTVFVGRLLSAISGLLVPLAFYIFAPVELKGRIKVSVSALLSLSTGLIYYSQELRSYSLLVLFCTIQLAFVLKLV
YEKEKNPKLCFSLLGISLLASYTHFFGFIWSASIFLGMFIEKLIFERKFSKEFFFFGISFGLLFLPVLYLLFNSDKIGIA
SWIPEAGTTAFIVFFDLIFHSGILKKFIPGIVASVALFVGFVSIYFQKSSSETKMEVLDFAHKKSVILFGIVLTIFSIAL
CVLSSIQPLITARNLLVTAPVLYFLIATLFSIFPIYKGRRLEFVLILISFVSLYYFTRYYYKPYKEQWRESSQYIISTVV
GHPKDFTLLCSSHAYNMEYFLKTAKVTGIVPRLYTKEEVNLFIQDSSKKNLVILETSWKYLNSEELESLFMRSNFDRKDQ
LFYGMRVVTIRKK
>Mature_493_residues
MVFGLSSFLTEIKKNKDLKIFLFVFTLGAFFRLFRLDLQSPWEDELFSIRASSVTSLGDLWNWMKDDPHPPLYQTLLYFW
FQLLQPTVFVGRLLSAISGLLVPLAFYIFAPVELKGRIKVSVSALLSLSTGLIYYSQELRSYSLLVLFCTIQLAFVLKLV
YEKEKNPKLCFSLLGISLLASYTHFFGFIWSASIFLGMFIEKLIFERKFSKEFFFFGISFGLLFLPVLYLLFNSDKIGIA
SWIPEAGTTAFIVFFDLIFHSGILKKFIPGIVASVALFVGFVSIYFQKSSSETKMEVLDFAHKKSVILFGIVLTIFSIAL
CVLSSIQPLITARNLLVTAPVLYFLIATLFSIFPIYKGRRLEFVLILISFVSLYYFTRYYYKPYKEQWRESSQYIISTVV
GHPKDFTLLCSSHAYNMEYFLKTAKVTGIVPRLYTKEEVNLFIQDSSKKNLVILETSWKYLNSEELESLFMRSNFDRKDQ
LFYGMRVVTIRKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57058; Mature: 57058

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCEEEEEEECC
>Mature Secondary Structure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HHHCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA