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The map label for this gene is 45657692

Identifier: 45657692

GI number: 45657692

Start: 2221285

End: 2222157

Strand: Reverse

Name: 45657692

Synonym: LIC11827

Alternate gene names: NA

Gene position: 2222157-2221285 (Counterclockwise)

Preceding gene: 45657694

Following gene: 45657691

Centisome position: 51.95

GC content: 34.02

Gene sequence:

>873_bases
ATGGCAAAATCAATTCCAGCCAAGAAAAAAAAACAAACTCAAAAAAAGGGAATTCTACAAGAATCGATCGGAAAAAAACT
TTCGGTTGCTATCATTACCTACAACGAAGAAAAAAACATAAAAGAGTGCATCGAATCTTGTTTAGAAATTGCAGATGAAA
TTGTGGTCTTAGACTCAATCAGCACGGATAAAACCGAAATGATCTCTAAGTCTTTTTCTTCCGTGAGATTTTATAAACAG
AGATTCAAAGGTCATATCGAACAAAAAAACGATGCGATTGCACTTTGTAAATACGACTGGATTCTTTCTTTAGACGCAGA
CGAAAGAATTTCTACAGAACTGAAAAATTCAATTCTATCGTTTAAACAAAAACAAGACGATGAAACTTTAAACGGTCTTC
AAGTTTCTCGTCTGACTTATCACATGGGAAAGTTTATACGTCATTCCGGTTGGTATCCTCAATATCGTTATCGTATTTTT
AAAAAAGGAAACGCGATTTGGGTAGGTGAAAATCCACACGATTATATTAGCATTCAAGGAAAAGGAAGTAAAATTTGCGG
AGATATTATTCACTATAGTTTTCGAGATCTTTCCCATCAAGTAAATACGATCAATCAGTTCTCTTCGATTGTTGCGTTTA
CAAGACAAAAAAAAGGAAAAAGATTTTCTATTTTGAGAACTATCTACAAACCGTTTTCTAAATTTATAGAGACGTATTTT
TTTAAGTTCGGGTTTTTAGACGGTTTTCCGGGTTGGGTAATTGCGGTTTCTTCTGCATATTCTACTTTTTTAAAAGACGC
CAAACAATACGAACTGCAAAAAGAAATTTTAGAACGACCGTCTAACGTGAAAGAGGACTATGGGCGCCATTAA

Upstream 100 bases:

>100_bases
CTCCCTAAGTTCCTAAAAATTCTCTTAAAAAACCAATGACAGAGAAGGAATTCATTCTACCATTAGAAAAAAGAACCGAT
TCCAGGAATCAATCAAACCG

Downstream 100 bases:

>100_bases
GTCGTTCTTTATAAAATTCTTTTCTCTTTTTCAAAGAAAAAAGAAAAAAAGACGTCCCGAAGAAGAAACGCCTCCAGTAC
GTGAAAGTTTTGGTTATAAG

Product: lipopolysaccharide biosynthesis glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MAKSIPAKKKKQTQKKGILQESIGKKLSVAIITYNEEKNIKECIESCLEIADEIVVLDSISTDKTEMISKSFSSVRFYKQ
RFKGHIEQKNDAIALCKYDWILSLDADERISTELKNSILSFKQKQDDETLNGLQVSRLTYHMGKFIRHSGWYPQYRYRIF
KKGNAIWVGENPHDYISIQGKGSKICGDIIHYSFRDLSHQVNTINQFSSIVAFTRQKKGKRFSILRTIYKPFSKFIETYF
FKFGFLDGFPGWVIAVSSAYSTFLKDAKQYELQKEILERPSNVKEDYGRH

Sequences:

>Translated_290_residues
MAKSIPAKKKKQTQKKGILQESIGKKLSVAIITYNEEKNIKECIESCLEIADEIVVLDSISTDKTEMISKSFSSVRFYKQ
RFKGHIEQKNDAIALCKYDWILSLDADERISTELKNSILSFKQKQDDETLNGLQVSRLTYHMGKFIRHSGWYPQYRYRIF
KKGNAIWVGENPHDYISIQGKGSKICGDIIHYSFRDLSHQVNTINQFSSIVAFTRQKKGKRFSILRTIYKPFSKFIETYF
FKFGFLDGFPGWVIAVSSAYSTFLKDAKQYELQKEILERPSNVKEDYGRH
>Mature_289_residues
AKSIPAKKKKQTQKKGILQESIGKKLSVAIITYNEEKNIKECIESCLEIADEIVVLDSISTDKTEMISKSFSSVRFYKQR
FKGHIEQKNDAIALCKYDWILSLDADERISTELKNSILSFKQKQDDETLNGLQVSRLTYHMGKFIRHSGWYPQYRYRIFK
KGNAIWVGENPHDYISIQGKGSKICGDIIHYSFRDLSHQVNTINQFSSIVAFTRQKKGKRFSILRTIYKPFSKFIETYFF
KFGFLDGFPGWVIAVSSAYSTFLKDAKQYELQKEILERPSNVKEDYGRH

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. WaaE/kdtX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 33728; Mature: 33597

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSIPAKKKKQTQKKGILQESIGKKLSVAIITYNEEKNIKECIESCLEIADEIVVLDSI
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEECC
STDKTEMISKSFSSVRFYKQRFKGHIEQKNDAIALCKYDWILSLDADERISTELKNSILS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHH
FKQKQDDETLNGLQVSRLTYHMGKFIRHSGWYPQYRYRIFKKGNAIWVGENPHDYISIQG
HHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCEEEECCCCCCEEEEEC
KGSKICGDIIHYSFRDLSHQVNTINQFSSIVAFTRQKKGKRFSILRTIYKPFSKFIETYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FKFGFLDGFPGWVIAVSSAYSTFLKDAKQYELQKEILERPSNVKEDYGRH
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC
>Mature Secondary Structure 
AKSIPAKKKKQTQKKGILQESIGKKLSVAIITYNEEKNIKECIESCLEIADEIVVLDSI
CCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHEEEEECC
STDKTEMISKSFSSVRFYKQRFKGHIEQKNDAIALCKYDWILSLDADERISTELKNSILS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHH
FKQKQDDETLNGLQVSRLTYHMGKFIRHSGWYPQYRYRIFKKGNAIWVGENPHDYISIQG
HHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCEEEECCCCCCEEEEEC
KGSKICGDIIHYSFRDLSHQVNTINQFSSIVAFTRQKKGKRFSILRTIYKPFSKFIETYF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
FKFGFLDGFPGWVIAVSSAYSTFLKDAKQYELQKEILERPSNVKEDYGRH
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]