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The map label for this gene is recN

Identifier: 45657492

GI number: 45657492

Start: 1982343

End: 1984049

Strand: Direct

Name: recN

Synonym: LIC11620

Alternate gene names: 45657492

Gene position: 1982343-1984049 (Clockwise)

Preceding gene: 45657488

Following gene: 45657493

Centisome position: 46.35

GC content: 39.19

Gene sequence:

>1707_bases
ATGTTGAAGACCCTGAATATAAGAGACTTTGCTCTGATTGAAGAAGCTTGTATCGATTTTCAAAAAGGAATGACCGTAAT
TACTGGAGAGACTGGAGCCGGAAAATCTCTCATTTTGGACGCTATTTCTTCTCTGTTAGGCGGAAAAAGCAGTCCTATGG
AAATTCGAACGAGTGCCCCTAGATATGTGTTAGAGGGTGTGTTCGATCTTTCTAAAAATCCAGCCGCGGTAGAATGGCTC
AAAGAAAAAGGTTTTCCCTTTGAATCCAAAGAACTCACCTTACATCGAGAATGTGGGCGGGATGGAAAATCTAGAATTTT
AATCAATCAGTCTTTGGCTTCTTCTACTACACTTCGAGGTTTAGGAGAATTGCTCGCCGAAGTTCACAACCAAAACGATC
AGATTCTTCTTTTGGATCGAGGAGAACAGTTAGACATTATCGATTTGCACGCAGGTCTTGTCCCTTTGAGAAACGAAGTG
AAGGAATGTTTTCTTACTTATAGAAGTCTGAAAAAACGTCTGGAAGAATTACGTAAGAGTGAGGAAGAAAAATCCAAACG
GATTGAATTTCTTAATTTTCAAATTCGGGAAATTAGAGATGTGGATCTGAAGGAAGGAGAAGAGGAAGGACTCAATCAAG
AAGAGCATCTTCTCGCGCACGGAGAATTATTGGCAGAGAATTATGAAATTTTATCTTCTCATTTGGCGGATAGCGAATCT
GCCATTCTTCCTTTGTTTCCGAAACTTCTGAGTGCGGCAGAAAAAATTAAATCCATTCAGCCCGATTTTTCGAAAACCTT
GGATTCTTTACAGGAAATTTATATCCAACTCAAAGAAATCAATTCTTCCATTTTAGATGAAAAAGAAGAGATTTTCTTTT
CTCCGGATAGACTTCAGTTTGTTCAATCTAGATTAGATTTAATTTCTAAGATGAAAAAGAAATACGGTTCCGATTTGGCA
GAGATTCTGGACTGCAAAAATAAAGCAGAACAGGAGTTAGAAGCGATGGAAAAAAATTCCAAAAATAAGGAATCTATGGA
AGTAGAGATAGAAAAGATAGCTTCCAGACTGGCTTCTCTATCAATTCAACTTTCTAAGTCTAGAAGAGAATCTCTGATTC
GTTTTGAATCTTCTCTGAAATTGGAATTGGAGCAACTTGGAATGCCTGGAGCTGCGGTTCAAGTTGTATTACGTTGGGAA
CCCAATCCGGAAGGAGAGGTTTCCGCTTCTGGTAAAAGTTATATTGTAAATGAATCCGGGCTCGACCAACTTGAATTTTA
TTTTAGTCCCAATCCAGGAGAAAAACCTAGACCACTTCGTAAGATTGCCTCGGGCGGAGAAGTTTCTAGAGTCATGTTGG
CAATTCGTTCCATTTTAGGCAGACAATCTAATTTACGAGTTTTGATTTTTGATGAAATCGATTCTGGTTTAGGTGGAGAG
ATCGCTATGGATGTGGCTCGCAAACTCAGAAATTTAGCCGAAAATCATCAGTTGATTTTGATTACCCACTTACAGCAGAT
CGCTTCGGCTGCCAACGATCATTTAAAAATTACTAAATCAGTGGAAGGAGGACGCACATTTTCCAAAGCGGAATTTCTAA
GTTTAGAGGAAAGAACTTTGGAACTTGCGAGAATGATTTCGGGTCAGAGAGTATCGAAAGGCGCTCTTGAACACGCAAAA
GAACTGCTGAAAAAACAGGCGGTTTAA

Upstream 100 bases:

>100_bases
CTAAAAGAGATACAAAAATTTTTTTCTAAGAAAAATGATTGCAATCATTTGTATAGCAATTAAATAAAGGGTATAATTTG
TTTAGTATTTTGAGGTAAGT

Downstream 100 bases:

>100_bases
TTGCAGATTTCTCGATTTAGAATCTCTGTAAAAAGGAGGTATGCGGATTAGAAAACTGTTTGGCAGCTACAAGAGAGTTT
TAAACTCTACTTATAGGAGA

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MLKTLNIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKSSPMEIRTSAPRYVLEGVFDLSKNPAAVEWL
KEKGFPFESKELTLHRECGRDGKSRILINQSLASSTTLRGLGELLAEVHNQNDQILLLDRGEQLDIIDLHAGLVPLRNEV
KECFLTYRSLKKRLEELRKSEEEKSKRIEFLNFQIREIRDVDLKEGEEEGLNQEEHLLAHGELLAENYEILSSHLADSES
AILPLFPKLLSAAEKIKSIQPDFSKTLDSLQEIYIQLKEINSSILDEKEEIFFSPDRLQFVQSRLDLISKMKKKYGSDLA
EILDCKNKAEQELEAMEKNSKNKESMEVEIEKIASRLASLSIQLSKSRRESLIRFESSLKLELEQLGMPGAAVQVVLRWE
PNPEGEVSASGKSYIVNESGLDQLEFYFSPNPGEKPRPLRKIASGGEVSRVMLAIRSILGRQSNLRVLIFDEIDSGLGGE
IAMDVARKLRNLAENHQLILITHLQQIASAANDHLKITKSVEGGRTFSKAEFLSLEERTLELARMISGQRVSKGALEHAK
ELLKKQAV

Sequences:

>Translated_568_residues
MLKTLNIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKSSPMEIRTSAPRYVLEGVFDLSKNPAAVEWL
KEKGFPFESKELTLHRECGRDGKSRILINQSLASSTTLRGLGELLAEVHNQNDQILLLDRGEQLDIIDLHAGLVPLRNEV
KECFLTYRSLKKRLEELRKSEEEKSKRIEFLNFQIREIRDVDLKEGEEEGLNQEEHLLAHGELLAENYEILSSHLADSES
AILPLFPKLLSAAEKIKSIQPDFSKTLDSLQEIYIQLKEINSSILDEKEEIFFSPDRLQFVQSRLDLISKMKKKYGSDLA
EILDCKNKAEQELEAMEKNSKNKESMEVEIEKIASRLASLSIQLSKSRRESLIRFESSLKLELEQLGMPGAAVQVVLRWE
PNPEGEVSASGKSYIVNESGLDQLEFYFSPNPGEKPRPLRKIASGGEVSRVMLAIRSILGRQSNLRVLIFDEIDSGLGGE
IAMDVARKLRNLAENHQLILITHLQQIASAANDHLKITKSVEGGRTFSKAEFLSLEERTLELARMISGQRVSKGALEHAK
ELLKKQAV
>Mature_568_residues
MLKTLNIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKSSPMEIRTSAPRYVLEGVFDLSKNPAAVEWL
KEKGFPFESKELTLHRECGRDGKSRILINQSLASSTTLRGLGELLAEVHNQNDQILLLDRGEQLDIIDLHAGLVPLRNEV
KECFLTYRSLKKRLEELRKSEEEKSKRIEFLNFQIREIRDVDLKEGEEEGLNQEEHLLAHGELLAENYEILSSHLADSES
AILPLFPKLLSAAEKIKSIQPDFSKTLDSLQEIYIQLKEINSSILDEKEEIFFSPDRLQFVQSRLDLISKMKKKYGSDLA
EILDCKNKAEQELEAMEKNSKNKESMEVEIEKIASRLASLSIQLSKSRRESLIRFESSLKLELEQLGMPGAAVQVVLRWE
PNPEGEVSASGKSYIVNESGLDQLEFYFSPNPGEKPRPLRKIASGGEVSRVMLAIRSILGRQSNLRVLIFDEIDSGLGGE
IAMDVARKLRNLAENHQLILITHLQQIASAANDHLKITKSVEGGRTFSKAEFLSLEERTLELARMISGQRVSKGALEHAK
ELLKKQAV

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=567, Percent_Identity=30.1587301587302, Blast_Score=256, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 63816; Mature: 63816

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTLNIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKSSPMEIRTSAP
CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCC
RYVLEGVFDLSKNPAAVEWLKEKGFPFESKELTLHRECGRDGKSRILINQSLASSTTLRG
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEHHHCCCCCCEEEEEHHHHHHHHHHH
LGELLAEVHNQNDQILLLDRGEQLDIIDLHAGLVPLRNEVKECFLTYRSLKKRLEELRKS
HHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEEKSKRIEFLNFQIREIRDVDLKEGEEEGLNQEEHLLAHGELLAENYEILSSHLADSES
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AILPLFPKLLSAAEKIKSIQPDFSKTLDSLQEIYIQLKEINSSILDEKEEIFFSPDRLQF
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHH
VQSRLDLISKMKKKYGSDLAEILDCKNKAEQELEAMEKNSKNKESMEVEIEKIASRLASL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SIQLSKSRRESLIRFESSLKLELEQLGMPGAAVQVVLRWEPNPEGEVSASGKSYIVNESG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCEECCCCEEEECCCC
LDQLEFYFSPNPGEKPRPLRKIASGGEVSRVMLAIRSILGRQSNLRVLIFDEIDSGLGGE
CCCEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCH
IAMDVARKLRNLAENHQLILITHLQQIASAANDHLKITKSVEGGRTFSKAEFLSLEERTL
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
ELARMISGQRVSKGALEHAKELLKKQAV
HHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKTLNIRDFALIEEACIDFQKGMTVITGETGAGKSLILDAISSLLGGKSSPMEIRTSAP
CCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEECCCC
RYVLEGVFDLSKNPAAVEWLKEKGFPFESKELTLHRECGRDGKSRILINQSLASSTTLRG
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEEHHHCCCCCCEEEEEHHHHHHHHHHH
LGELLAEVHNQNDQILLLDRGEQLDIIDLHAGLVPLRNEVKECFLTYRSLKKRLEELRKS
HHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEEKSKRIEFLNFQIREIRDVDLKEGEEEGLNQEEHLLAHGELLAENYEILSSHLADSES
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AILPLFPKLLSAAEKIKSIQPDFSKTLDSLQEIYIQLKEINSSILDEKEEIFFSPDRLQF
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHH
VQSRLDLISKMKKKYGSDLAEILDCKNKAEQELEAMEKNSKNKESMEVEIEKIASRLASL
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
SIQLSKSRRESLIRFESSLKLELEQLGMPGAAVQVVLRWEPNPEGEVSASGKSYIVNESG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCEECCCCEEEECCCC
LDQLEFYFSPNPGEKPRPLRKIASGGEVSRVMLAIRSILGRQSNLRVLIFDEIDSGLGGE
CCCEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCH
IAMDVARKLRNLAENHQLILITHLQQIASAANDHLKITKSVEGGRTFSKAEFLSLEERTL
HHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
ELARMISGQRVSKGALEHAKELLKKQAV
HHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]