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The map label for this gene is 45657468

Identifier: 45657468

GI number: 45657468

Start: 1955910

End: 1956278

Strand: Direct

Name: 45657468

Synonym: LIC11596

Alternate gene names: NA

Gene position: 1955910-1956278 (Clockwise)

Preceding gene: 45657466

Following gene: 45657469

Centisome position: 45.73

GC content: 36.86

Gene sequence:

>369_bases
TTGTTTTCTGTACTTCTAAACAAAAAACACTGGTACCGAAGAAGAGTCTCGGATTGTATGAAAAAAAAATCCGTCAAATT
TGGATATTCAGGAGCGAAAACGATTTATATTCGAAAGCTTCGATTTGAAGAAGCACAATGGAAACTAGAAAAGGAAATTC
AAGAAGCTTTTTTAGCCGGGGAAACTCTGATTGAAATTGTTCACGGTATTGGAGAAGGAATTCTCAAAAAACTAACTTTA
GATACGATTCGATCTCACGATTTTCTAAAGGAAGTAGATTATTCTCAGTTTGGAATTTCCAACCCGGGTTCCACGTTGGT
CGAAGTATTAGGTCCCGATAAGGACGTTCTCAAAAGGTATCTCAGATGA

Upstream 100 bases:

>100_bases
TGTTCGTTCAAGGTTTAAAACCTACCTCTTTTTATAGAATGGATCGATTGAAAATTGTACCGAAACGTTCGGAGAGTGAA
AGCATAAAAAATGAAATTCT

Downstream 100 bases:

>100_bases
CAAAAGTAGAAACTCGATTGGAAATTTTAGACGTAACTTTGAGAGACGGGGAGCAGACCAGAGGGGTCAGTTTTTCCACT
TCCGAAAAACTAAATATCGC

Product: DNA mismatch repair protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MFSVLLNKKHWYRRRVSDCMKKKSVKFGYSGAKTIYIRKLRFEEAQWKLEKEIQEAFLAGETLIEIVHGIGEGILKKLTL
DTIRSHDFLKEVDYSQFGISNPGSTLVEVLGPDKDVLKRYLR

Sequences:

>Translated_122_residues
MFSVLLNKKHWYRRRVSDCMKKKSVKFGYSGAKTIYIRKLRFEEAQWKLEKEIQEAFLAGETLIEIVHGIGEGILKKLTL
DTIRSHDFLKEVDYSQFGISNPGSTLVEVLGPDKDVLKRYLR
>Mature_122_residues
MFSVLLNKKHWYRRRVSDCMKKKSVKFGYSGAKTIYIRKLRFEEAQWKLEKEIQEAFLAGETLIEIVHGIGEGILKKLTL
DTIRSHDFLKEVDYSQFGISNPGSTLVEVLGPDKDVLKRYLR

Specific function: Unknown

COG id: COG1193

COG function: function code L; Mismatch repair ATPase (MutS family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14223; Mature: 14223

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVLLNKKHWYRRRVSDCMKKKSVKFGYSGAKTIYIRKLRFEEAQWKLEKEIQEAFLAG
CCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
ETLIEIVHGIGEGILKKLTLDTIRSHDFLKEVDYSQFGISNPGSTLVEVLGPDKDVLKRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHCCCHHHHHHH
LR
CC
>Mature Secondary Structure
MFSVLLNKKHWYRRRVSDCMKKKSVKFGYSGAKTIYIRKLRFEEAQWKLEKEIQEAFLAG
CCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
ETLIEIVHGIGEGILKKLTLDTIRSHDFLKEVDYSQFGISNPGSTLVEVLGPDKDVLKRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHCCCHHHHHHH
LR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA