Click here to switch to the map view.

The map label for this gene is 45657434

Identifier: 45657434

GI number: 45657434

Start: 1922154

End: 1922897

Strand: Direct

Name: 45657434

Synonym: LIC11561

Alternate gene names: NA

Gene position: 1922154-1922897 (Clockwise)

Preceding gene: 45657433

Following gene: 45657435

Centisome position: 44.94

GC content: 34.68

Gene sequence:

>744_bases
ATGAAACTTTCAACGGATTTTTCTGTACGAAATTTGAGTCTTATTTTGGAAAAACAAGTAGAGGGTTCCAGTTTTGCGGG
CCTGACTTTGAACCAAAATTTTAAAAGTAGAGTATTGGACGTTTTTCCGGGTGGGGCGTGGCTTTCTATCGGAGATAAAA
GGCTGAAAACATCCTCACAGTCTAATATTTTGTTTATAGGAGAGACTCTTACATTAGTAGCAAAGTATAGCACAAAAGGA
ATAGAGTTACGTATTTTAGACCGAGAATTGAAAGGTAAAGAAGATATTCCTTATAGACTGGAGAGCATGGGAATGAGTGT
TCAGGAACTTTCTGAAAAAGTTGTAGATTCCAATTTTCAAGAGTTTTCTATCGAGGACTCTATATTCAAGGTTTTGAAAT
CATATTATCCTTTTTTAGAATGGACCTCGGATTTACCATACTTTCGCTGGGAGTTTGACGGAGGAAATGCGGAAGGAATT
TATGAATCAAAAAAAGAATTTAAAAAATTTTTATTTCGGATTCAAACGAAGAATACTGGAAGGACAATTGTTCTATTTCT
TTGGGAGGAAAACTTGGGAGAAGATTTGCAAATCAACCTCACTTTCGATAATTTGAAAATGTACTTGCACGCTTGTCAAA
ACAAAGAAAAATTTAAGCAGATTTTAGCCGAATCTTTGGTGAGTTTTCAGGGATACAATTTATCTTATAAACCATCTCTA
ACTAGAAAAGAATGGAATGCTTAG

Upstream 100 bases:

>100_bases
TAGAACAGATCTCAGAGTCTAATCTTTAAGAGATACGAAATTATCAGAAAGTTTTCGAGTGAGAGTAGTGTCTAAATAAG
ATACATTAAAGCGAGCGCTT

Downstream 100 bases:

>100_bases
ATGATCAGCGTGGCTCTTAAATTCATTCCTAAAAAAGACAATGCGCCTGTAATTACGGCTGCCGCTTCCGGCTTTTTAGG
TGACGTTATCCGTAACATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKLSTDFSVRNLSLILEKQVEGSSFAGLTLNQNFKSRVLDVFPGGAWLSIGDKRLKTSSQSNILFIGETLTLVAKYSTKG
IELRILDRELKGKEDIPYRLESMGMSVQELSEKVVDSNFQEFSIEDSIFKVLKSYYPFLEWTSDLPYFRWEFDGGNAEGI
YESKKEFKKFLFRIQTKNTGRTIVLFLWEENLGEDLQINLTFDNLKMYLHACQNKEKFKQILAESLVSFQGYNLSYKPSL
TRKEWNA

Sequences:

>Translated_247_residues
MKLSTDFSVRNLSLILEKQVEGSSFAGLTLNQNFKSRVLDVFPGGAWLSIGDKRLKTSSQSNILFIGETLTLVAKYSTKG
IELRILDRELKGKEDIPYRLESMGMSVQELSEKVVDSNFQEFSIEDSIFKVLKSYYPFLEWTSDLPYFRWEFDGGNAEGI
YESKKEFKKFLFRIQTKNTGRTIVLFLWEENLGEDLQINLTFDNLKMYLHACQNKEKFKQILAESLVSFQGYNLSYKPSL
TRKEWNA
>Mature_247_residues
MKLSTDFSVRNLSLILEKQVEGSSFAGLTLNQNFKSRVLDVFPGGAWLSIGDKRLKTSSQSNILFIGETLTLVAKYSTKG
IELRILDRELKGKEDIPYRLESMGMSVQELSEKVVDSNFQEFSIEDSIFKVLKSYYPFLEWTSDLPYFRWEFDGGNAEGI
YESKKEFKKFLFRIQTKNTGRTIVLFLWEENLGEDLQINLTFDNLKMYLHACQNKEKFKQILAESLVSFQGYNLSYKPSL
TRKEWNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28651; Mature: 28651

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSTDFSVRNLSLILEKQVEGSSFAGLTLNQNFKSRVLDVFPGGAWLSIGDKRLKTSSQ
CCCCCCCCHHHHEEEEEECCCCCCEEEEEECCCHHHHHHEECCCCEEEEECCHHHCCCCC
SNILFIGETLTLVAKYSTKGIELRILDRELKGKEDIPYRLESMGMSVQELSEKVVDSNFQ
CCEEEEECCEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCH
EFSIEDSIFKVLKSYYPFLEWTSDLPYFRWEFDGGNAEGIYESKKEFKKFLFRIQTKNTG
HCCHHHHHHHHHHHHCCHHEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEEECCCCC
RTIVLFLWEENLGEDLQINLTFDNLKMYLHACQNKEKFKQILAESLVSFQGYNLSYKPSL
CEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCC
TRKEWNA
CCCCCCC
>Mature Secondary Structure
MKLSTDFSVRNLSLILEKQVEGSSFAGLTLNQNFKSRVLDVFPGGAWLSIGDKRLKTSSQ
CCCCCCCCHHHHEEEEEECCCCCCEEEEEECCCHHHHHHEECCCCEEEEECCHHHCCCCC
SNILFIGETLTLVAKYSTKGIELRILDRELKGKEDIPYRLESMGMSVQELSEKVVDSNFQ
CCEEEEECCEEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCH
EFSIEDSIFKVLKSYYPFLEWTSDLPYFRWEFDGGNAEGIYESKKEFKKFLFRIQTKNTG
HCCHHHHHHHHHHHHCCHHEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHEEEECCCCC
RTIVLFLWEENLGEDLQINLTFDNLKMYLHACQNKEKFKQILAESLVSFQGYNLSYKPSL
CEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCC
TRKEWNA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA