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The map label for this gene is 45657389

Identifier: 45657389

GI number: 45657389

Start: 1873866

End: 1874195

Strand: Direct

Name: 45657389

Synonym: LIC11516

Alternate gene names: NA

Gene position: 1873866-1874195 (Clockwise)

Preceding gene: 45657388

Following gene: 45657390

Centisome position: 43.81

GC content: 34.55

Gene sequence:

>330_bases
ATGGAAATAACGTCTGAAATTAAAAATCATTCCAAAATCATTCATTTGATTGGGAACTTAGACGTACACAATACTCATAA
AATAGAATCTGCTTTTATGGAACAGATCAAGACGGGAAATTCTCGTGTGATCGTTTTGGATCTTTCTTCTGTTGAATTCA
TTTCGTCTGCAGGGCTCAGAATTATTGTAGCTGCTCTCAGAATTTGTAGAGAAAAAGACGTGGAATTCAGATTGGCTGGA
ATCAAACCCGCAGTAAAAAAGGTATTCGAAATCATAGATATGAATTCCATGTTTAGCATTTTTGAAACTCTAGAATCCGC
TATAAAATAG

Upstream 100 bases:

>100_bases
GTGTATCTGATCGAAAAGCTCATGGATTCGGTCGATTATTCTAGTGAAGACGGAAAGAATTTTTTAGTTCTCAAAAAGAA
TTTTCGAAACAAGGCTTCCA

Downstream 100 bases:

>100_bases
TTTCTCTTCTCACATTCGACTCGAATTTAACTTTCCCGAGAATCCTTTCTTTAAAAACTGGATTTATTTTATTCCATTGA
AAGGTTCTCTCATGTCCGAA

Product: anti-sigma factor antagonist

Products: NA

Alternate protein names: Antagonist Of Anti-Sigma Factor; AntiSigma Factor Antagonist; Anti-Anti-Sigma Factor Family Protein

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MEITSEIKNHSKIIHLIGNLDVHNTHKIESAFMEQIKTGNSRVIVLDLSSVEFISSAGLRIIVAALRICREKDVEFRLAG
IKPAVKKVFEIIDMNSMFSIFETLESAIK

Sequences:

>Translated_109_residues
MEITSEIKNHSKIIHLIGNLDVHNTHKIESAFMEQIKTGNSRVIVLDLSSVEFISSAGLRIIVAALRICREKDVEFRLAG
IKPAVKKVFEIIDMNSMFSIFETLESAIK
>Mature_109_residues
MEITSEIKNHSKIIHLIGNLDVHNTHKIESAFMEQIKTGNSRVIVLDLSSVEFISSAGLRIIVAALRICREKDVEFRLAG
IKPAVKKVFEIIDMNSMFSIFETLESAIK

Specific function: Unknown

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12270; Mature: 12270

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITSEIKNHSKIIHLIGNLDVHNTHKIESAFMEQIKTGNSRVIVLDLSSVEFISSAGLR
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCHH
IIVAALRICREKDVEFRLAGIKPAVKKVFEIIDMNSMFSIFETLESAIK
HHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEITSEIKNHSKIIHLIGNLDVHNTHKIESAFMEQIKTGNSRVIVLDLSSVEFISSAGLR
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHCCHH
IIVAALRICREKDVEFRLAGIKPAVKKVFEIIDMNSMFSIFETLESAIK
HHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA