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The map label for this gene is 45657299

Identifier: 45657299

GI number: 45657299

Start: 1750506

End: 1750901

Strand: Direct

Name: 45657299

Synonym: LIC11423

Alternate gene names: NA

Gene position: 1750506-1750901 (Clockwise)

Preceding gene: 45657294

Following gene: 45657300

Centisome position: 40.93

GC content: 39.14

Gene sequence:

>396_bases
TTGCAAATTGATTCTCGAGAAGGAAAAATCATGAAGATATCAGTAGGAAATCTGCCTCAGGAGTTGACCGAAGACGAACT
AAAAAAGATTTTTTCGGAATTCGGAACCGTCGAGGAAGTACATATTAAAAAAGATAAAACCACAGGCCGTTCTTTATCTT
ATGGATCCATTGAAATGGAAGATTCCGCCGGAGCAAAAGCAATTGCGGGATTGAATAAAAAAGAAATCCAAGGAAAACAA
ATTGCCGTGGTAGATTCTGAGGAATTAAAAAAAGAATTCGAAAGAAAACAATCCCTAAAGAATGGAGGATCATCCGGTAA
GATTCACGGAAATCAATCAAAGACTGGAGGTTTTTCCGGGGCTGGGGTTAGAAGAACCGGAGGAAGAGGAAAATGA

Upstream 100 bases:

>100_bases
TCTTGTTTCCAGTTTTCTTGGAAATTTTTTTATAAAGAACATAGAACTTGAGTGTTTTGTTCCAATATAGATGGAATTTG
GTTTTCAATAGAATTAGATT

Downstream 100 bases:

>100_bases
AATTTACACGTTTAATATTTGTCTTAGCTATTCTTTGTGCCGTAGTAGCTCCTACATTTGCAGAAGATTTAGTTATCAAA
GAAATTCGTATTGGAACTGG

Product: glycine rich RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MQIDSREGKIMKISVGNLPQELTEDELKKIFSEFGTVEEVHIKKDKTTGRSLSYGSIEMEDSAGAKAIAGLNKKEIQGKQ
IAVVDSEELKKEFERKQSLKNGGSSGKIHGNQSKTGGFSGAGVRRTGGRGK

Sequences:

>Translated_131_residues
MQIDSREGKIMKISVGNLPQELTEDELKKIFSEFGTVEEVHIKKDKTTGRSLSYGSIEMEDSAGAKAIAGLNKKEIQGKQ
IAVVDSEELKKEFERKQSLKNGGSSGKIHGNQSKTGGFSGAGVRRTGGRGK
>Mature_131_residues
MQIDSREGKIMKISVGNLPQELTEDELKKIFSEFGTVEEVHIKKDKTTGRSLSYGSIEMEDSAGAKAIAGLNKKEIQGKQ
IAVVDSEELKKEFERKQSLKNGGSSGKIHGNQSKTGGFSGAGVRRTGGRGK

Specific function: Unknown

COG id: COG0724

COG function: function code R; RNA-binding proteins (RRM domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14155; Mature: 14155

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50102 RRM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIDSREGKIMKISVGNLPQELTEDELKKIFSEFGTVEEVHIKKDKTTGRSLSYGSIEME
CCCCCCCCCEEEEECCCCCHHCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEC
DSAGAKAIAGLNKKEIQGKQIAVVDSEELKKEFERKQSLKNGGSSGKIHGNQSKTGGFSG
CCCCCHHHHCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC
AGVRRTGGRGK
CCCCCCCCCCC
>Mature Secondary Structure
MQIDSREGKIMKISVGNLPQELTEDELKKIFSEFGTVEEVHIKKDKTTGRSLSYGSIEME
CCCCCCCCCEEEEECCCCCHHCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCEEEC
DSAGAKAIAGLNKKEIQGKQIAVVDSEELKKEFERKQSLKNGGSSGKIHGNQSKTGGFSG
CCCCCHHHHCCCHHHCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCC
AGVRRTGGRGK
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA