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The map label for this gene is rfaC2

Identifier: 45657192

GI number: 45657192

Start: 1619480

End: 1620511

Strand: Direct

Name: rfaC2

Synonym: LIC11312

Alternate gene names: 45657192

Gene position: 1619480-1620511 (Clockwise)

Preceding gene: 45657191

Following gene: 45657193

Centisome position: 37.86

GC content: 35.08

Gene sequence:

>1032_bases
GTGAACGAAAAAATACTTTTGATTCAAACCGCTTTTTTAGGAGATTTGATTTTAACGACTTCTTTCTTTAGAGAAGTCAA
AAAAAAATACCCGAACTCATATCTTACGGTTGTGGTTAATAAAGGAACCGAAAGTGTACTTGAGGCAAATCCTTATATAG
ATAGTCTGATTCCTTTGGATAAGAAGGAATTCAAAAAATCTATTTGGAAATTTTTTTCCTTTCTGAGAGAACTTCGAAAA
GAAAATTATACACTTTGTATTTTGCCTCATTTTTCTTTTCGTTCTACTTTGATCGGATTTGCAAGTGGCGCCAAGGAAAG
AATTGGATACGAAACAGCGGGTTTTTCTTTTTTGCTAACTAAAAAAATTCCAAGACCTATTTTAGGAATGCACGAGGTAG
AAAAACTGTTTTCTTTATTATACAGTAAAGAAGAATATTCTAATATTCAAAAGCGCCCTGAGCTTTATTGGAAAGAAGAA
TCCGTTTTTAGAATTCGTGAATTGATGAAAGAGAACAGACTTGAATCTGGAAATTACGTTTTACTTGCTCCTAGTTCCGT
CTGGGAAACCAAACGGATGCCTGCTTCTAAGTTTAGAGTTTTAGGGGAACGTATTTTTAAGGAAACCGGTAAGAAGGTGG
TTTTAATTGGATCCAAAGCAGATTTAGATCTTTGCGAAGAAGTAGGTTCTGGTTACGCAATTAATTTTGCGGGAAAAACA
AATTTACCAGAACTTTCGTTTTTAGTTTCTAAAGCGGCTTTGGTTATCAGTAATGATTCTTCTCCGATTCATTTTGCTTC
TGCATTTAACATTCCTACTTTGGCAGTTTTTGGGGCTACGGTTCCGGATTTTGGTTATACTCCACTTGCTGATCTTTCTT
TTATCTCTGAGATTCATGGACTTACTTGTAGACCTTGTGGGATTCACGGTGGTAGAACTTGTCCTGAAGGACATTTTCGT
TGTATGAAGGAACAAGATACCAATAAAATGTTTGAAGTAGCAGTCCAATTAGAACAAGGAAATGTAAAATGA

Upstream 100 bases:

>100_bases
AAAAAAGAACGTTTTCAAAACGGTTTGGCTCTTTCTATCGGAGGTTTGGGTGTGAATAATTTTGCTACGATTCTTTCTAA
AGTTTAAAACGGAATTGAAC

Downstream 100 bases:

>100_bases
CTTCATATATTTATTCGGAACGAATCGAAAAAGTTCAAAAAAGATTAAAAGATGGTGAGGTTTTGATCGTCTTTGCGGCT
TCTCATTTAATCCGAAATCG

Product: lipopolysaccharide heptosyltransferase II

Products: NA

Alternate protein names: ADP-heptose--LPS heptosyltransferase II [H]

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MNEKILLIQTAFLGDLILTTSFFREVKKKYPNSYLTVVVNKGTESVLEANPYIDSLIPLDKKEFKKSIWKFFSFLRELRK
ENYTLCILPHFSFRSTLIGFASGAKERIGYETAGFSFLLTKKIPRPILGMHEVEKLFSLLYSKEEYSNIQKRPELYWKEE
SVFRIRELMKENRLESGNYVLLAPSSVWETKRMPASKFRVLGERIFKETGKKVVLIGSKADLDLCEEVGSGYAINFAGKT
NLPELSFLVSKAALVISNDSSPIHFASAFNIPTLAVFGATVPDFGYTPLADLSFISEIHGLTCRPCGIHGGRTCPEGHFR
CMKEQDTNKMFEVAVQLEQGNVK

Sequences:

>Translated_343_residues
MNEKILLIQTAFLGDLILTTSFFREVKKKYPNSYLTVVVNKGTESVLEANPYIDSLIPLDKKEFKKSIWKFFSFLRELRK
ENYTLCILPHFSFRSTLIGFASGAKERIGYETAGFSFLLTKKIPRPILGMHEVEKLFSLLYSKEEYSNIQKRPELYWKEE
SVFRIRELMKENRLESGNYVLLAPSSVWETKRMPASKFRVLGERIFKETGKKVVLIGSKADLDLCEEVGSGYAINFAGKT
NLPELSFLVSKAALVISNDSSPIHFASAFNIPTLAVFGATVPDFGYTPLADLSFISEIHGLTCRPCGIHGGRTCPEGHFR
CMKEQDTNKMFEVAVQLEQGNVK
>Mature_343_residues
MNEKILLIQTAFLGDLILTTSFFREVKKKYPNSYLTVVVNKGTESVLEANPYIDSLIPLDKKEFKKSIWKFFSFLRELRK
ENYTLCILPHFSFRSTLIGFASGAKERIGYETAGFSFLLTKKIPRPILGMHEVEKLFSLLYSKEEYSNIQKRPELYWKEE
SVFRIRELMKENRLESGNYVLLAPSSVWETKRMPASKFRVLGERIFKETGKKVVLIGSKADLDLCEEVGSGYAINFAGKT
NLPELSFLVSKAALVISNDSSPIHFASAFNIPTLAVFGATVPDFGYTPLADLSFISEIHGLTCRPCGIHGGRTCPEGHFR
CMKEQDTNKMFEVAVQLEQGNVK

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=299, Percent_Identity=25.752508361204, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI1790062, Length=287, Percent_Identity=27.5261324041812, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011910 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 38891; Mature: 38891

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKILLIQTAFLGDLILTTSFFREVKKKYPNSYLTVVVNKGTESVLEANPYIDSLIPLD
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCHHHHCCCC
KKEFKKSIWKFFSFLRELRKENYTLCILPHFSFRSTLIGFASGAKERIGYETAGFSFLLT
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCHHHHCCCCCCCCEEEEE
KKIPRPILGMHEVEKLFSLLYSKEEYSNIQKRPELYWKEESVFRIRELMKENRLESGNYV
CCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCCCCCCEE
LLAPSSVWETKRMPASKFRVLGERIFKETGKKVVLIGSKADLDLCEEVGSGYAINFAGKT
EECCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCEEEEECCCC
NLPELSFLVSKAALVISNDSSPIHFASAFNIPTLAVFGATVPDFGYTPLADLSFISEIHG
CCCHHHHHHHHEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCC
LTCRPCGIHGGRTCPEGHFRCMKEQDTNKMFEVAVQLEQGNVK
CEECCCCCCCCCCCCHHHHHHHHHHCCHHEEEHEEEECCCCCC
>Mature Secondary Structure
MNEKILLIQTAFLGDLILTTSFFREVKKKYPNSYLTVVVNKGTESVLEANPYIDSLIPLD
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCHHHHCCCC
KKEFKKSIWKFFSFLRELRKENYTLCILPHFSFRSTLIGFASGAKERIGYETAGFSFLLT
HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCHHHHCCCCCCCCEEEEE
KKIPRPILGMHEVEKLFSLLYSKEEYSNIQKRPELYWKEESVFRIRELMKENRLESGNYV
CCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCEECHHHHHHHHHHHHHCCCCCCCEE
LLAPSSVWETKRMPASKFRVLGERIFKETGKKVVLIGSKADLDLCEEVGSGYAINFAGKT
EECCCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCEEEEECCCC
NLPELSFLVSKAALVISNDSSPIHFASAFNIPTLAVFGATVPDFGYTPLADLSFISEIHG
CCCHHHHHHHHEEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCC
LTCRPCGIHGGRTCPEGHFRCMKEQDTNKMFEVAVQLEQGNVK
CEECCCCCCCCCCCCHHHHHHHHHHCCHHEEEHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2198271; 8478319 [H]