Click here to switch to the map view.

The map label for this gene is 45657179

Identifier: 45657179

GI number: 45657179

Start: 1607214

End: 1607618

Strand: Direct

Name: 45657179

Synonym: LIC11299

Alternate gene names: NA

Gene position: 1607214-1607618 (Clockwise)

Preceding gene: 45657178

Following gene: 45657183

Centisome position: 37.58

GC content: 39.01

Gene sequence:

>405_bases
ATGACTCTAAAAACAAAAAATTTGAGAGGAACGAAGGTGATAAGAATTTTAAATTGTATTCTTGTGTTTTTACTTGCTTT
CGGGGCTTGTACAAAACAAGTCAAAGAGCATATTCACGTAGATACGGGAGTCACCGTAGAGGTGTTAGGCGTTCACAAAT
ACAAATTGATCGCGATTGGTGGAGCTTCTTCAACCTCTGTCGAAGAAAACGATACATTCAAAATGAAGAATACTTCTTGC
ACCGCCGCGAAATCTATTGCGGCGCGTAAATTAGAAGAACTTGAACCGGAACAAAAAAACAGATTATTTTTTATGGAAAC
CGTGGACACGAAATATATAGACGACGGGGCTTATTGTGAAATTACGTATCACTATGAACTTCCTGCGCCTAAGAAGCAGC
AGTAG

Upstream 100 bases:

>100_bases
AAATTGATAAAGTTTTTGAAATGAGCAAGGATTTAGGGTGTTTAAGTTCCTACATTTTTACTTATAAGAACGGTTGCGAA
CATTCTAAGTCATTTTTAAG

Downstream 100 bases:

>100_bases
TTCCCGGATATTCTCTGGGAAAGTAACGGATCGGTTCTATAAAAGAAACTCTGTTTCTTCCCTTTTTTTTAGATTCATAA
AGAGCTGAGTCTATGGAATG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MTLKTKNLRGTKVIRILNCILVFLLAFGACTKQVKEHIHVDTGVTVEVLGVHKYKLIAIGGASSTSVEENDTFKMKNTSC
TAAKSIAARKLEELEPEQKNRLFFMETVDTKYIDDGAYCEITYHYELPAPKKQQ

Sequences:

>Translated_134_residues
MTLKTKNLRGTKVIRILNCILVFLLAFGACTKQVKEHIHVDTGVTVEVLGVHKYKLIAIGGASSTSVEENDTFKMKNTSC
TAAKSIAARKLEELEPEQKNRLFFMETVDTKYIDDGAYCEITYHYELPAPKKQQ
>Mature_133_residues
TLKTKNLRGTKVIRILNCILVFLLAFGACTKQVKEHIHVDTGVTVEVLGVHKYKLIAIGGASSTSVEENDTFKMKNTSCT
AAKSIAARKLEELEPEQKNRLFFMETVDTKYIDDGAYCEITYHYELPAPKKQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15070; Mature: 14938

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKTKNLRGTKVIRILNCILVFLLAFGACTKQVKEHIHVDTGVTVEVLGVHKYKLIAIG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEE
GASSTSVEENDTFKMKNTSCTAAKSIAARKLEELEPEQKNRLFFMETVDTKYIDDGAYCE
CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCEEE
ITYHYELPAPKKQQ
EEEEEECCCCCCCC
>Mature Secondary Structure 
TLKTKNLRGTKVIRILNCILVFLLAFGACTKQVKEHIHVDTGVTVEVLGVHKYKLIAIG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEEEE
GASSTSVEENDTFKMKNTSCTAAKSIAARKLEELEPEQKNRLFFMETVDTKYIDDGAYCE
CCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEECCCCEEE
ITYHYELPAPKKQQ
EEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA