Click here to switch to the map view.

The map label for this gene is 45657156

Identifier: 45657156

GI number: 45657156

Start: 1574168

End: 1575277

Strand: Direct

Name: 45657156

Synonym: LIC11274

Alternate gene names: NA

Gene position: 1574168-1575277 (Clockwise)

Preceding gene: 45657149

Following gene: 45657158

Centisome position: 36.8

GC content: 36.49

Gene sequence:

>1110_bases
ATGAAAAGACTGATTCTTATATCCATTCTGATTTCCATTCTTCCCGTTTCTGTATTTGGAGAAGCGGTTTCTAGTAAGGC
CTATAAAAAAAGGGTGGAATTGCTTTTATATTTAAGAGCGATCGAACCGATTGTTCGAAACTACAAAGGAGAAGTTCCTG
GTGGACAGAATCAACAGAATACAGGTGCAACGGCTGCAAATAACCAGCAAACGGGAGGAGCTCCGGAACAAGATGGAGAT
AGGGTTAAAAAGTATAAAGAACTCAAAAGACTCTATCAAGAAGGGCTTCAGTATTTTTTTGAAAACAATCACGTAAACGC
ATATCGTAGATTTTTAGAAGCCCAACTTGGGACGGAGATGTTATTGGAAGAACTTTCTCAGTTCTATGTTGAAAGAACGG
AAGAAATTTTAAAATCCGCTATTGAAAAGAAAAATCCTAACAATCCGGAAGATAGAAATTTAGTAGATATTGCAATTGAA
TGGAGTAAAAATTCTTTCATAGTAAGGGATATGACTGCGAATCGAGAAGCTCCCCTTACTAGAAGGATGTACAATCCTAG
AGATTTTCATTACGTAACGAATAAATATGCGATTGAGAAAAATATGGAAATGGGTTATAAATTTTTGGGACTCGCCAAAG
AAACCCGTAACAATGCTCTTAAAATCGAAAAACATTTAGAGAAACACCAGAAACTTCAACCAAGCCATAGAAAACATAGA
ATCGAACATTATATCGCTGCGATTCAACTTTGTAGAGACGCAAGGGCGAACGCGATCAATATTTTCAAGTTAAAATATCC
ATACGATAACTATTATCTATTTAAAAGCGACGCAAAAACTGAAGCTATCAAAGACGACGAAGGAAAAGCCGGACCTTCTG
AACCAGTTTCTCTCAACGGAGTTACTTACGATTTCAGCCAAAATCCTACATTAGAATATGATCATAGAATGAGTCCCGTA
TTTGATCGTAGAATTCCAGAAGAATACCGTAGAGACGCTGTGGACATTTTAGAAAAAATTTACGATGACGAAGTTAAAAA
TCGAATTTTCTTAAAATGGGATCAGGAAAAACGTAAACAGTTGATGGGAGATAAGGCTCCTAACAAGTAA

Upstream 100 bases:

>100_bases
AATTCGAACACCATTCTAACCGATAGAGTAGGAAGAAAAGCACTAATTTCTTTGTTGCCTCCGGCTTAAAAAACCGGAAA
GCTCTGGAAAAGGTTAACCG

Downstream 100 bases:

>100_bases
GGTTTTCTTCTCGGGATTGCGATGACGTGGGCGCCCAGATTTGCATAAAACTAGGCGCTGATTCTGAAACGCAAATTTGA
GTCGTTTTAGAAAAATTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MKRLILISILISILPVSVFGEAVSSKAYKKRVELLLYLRAIEPIVRNYKGEVPGGQNQQNTGATAANNQQTGGAPEQDGD
RVKKYKELKRLYQEGLQYFFENNHVNAYRRFLEAQLGTEMLLEELSQFYVERTEEILKSAIEKKNPNNPEDRNLVDIAIE
WSKNSFIVRDMTANREAPLTRRMYNPRDFHYVTNKYAIEKNMEMGYKFLGLAKETRNNALKIEKHLEKHQKLQPSHRKHR
IEHYIAAIQLCRDARANAINIFKLKYPYDNYYLFKSDAKTEAIKDDEGKAGPSEPVSLNGVTYDFSQNPTLEYDHRMSPV
FDRRIPEEYRRDAVDILEKIYDDEVKNRIFLKWDQEKRKQLMGDKAPNK

Sequences:

>Translated_369_residues
MKRLILISILISILPVSVFGEAVSSKAYKKRVELLLYLRAIEPIVRNYKGEVPGGQNQQNTGATAANNQQTGGAPEQDGD
RVKKYKELKRLYQEGLQYFFENNHVNAYRRFLEAQLGTEMLLEELSQFYVERTEEILKSAIEKKNPNNPEDRNLVDIAIE
WSKNSFIVRDMTANREAPLTRRMYNPRDFHYVTNKYAIEKNMEMGYKFLGLAKETRNNALKIEKHLEKHQKLQPSHRKHR
IEHYIAAIQLCRDARANAINIFKLKYPYDNYYLFKSDAKTEAIKDDEGKAGPSEPVSLNGVTYDFSQNPTLEYDHRMSPV
FDRRIPEEYRRDAVDILEKIYDDEVKNRIFLKWDQEKRKQLMGDKAPNK
>Mature_369_residues
MKRLILISILISILPVSVFGEAVSSKAYKKRVELLLYLRAIEPIVRNYKGEVPGGQNQQNTGATAANNQQTGGAPEQDGD
RVKKYKELKRLYQEGLQYFFENNHVNAYRRFLEAQLGTEMLLEELSQFYVERTEEILKSAIEKKNPNNPEDRNLVDIAIE
WSKNSFIVRDMTANREAPLTRRMYNPRDFHYVTNKYAIEKNMEMGYKFLGLAKETRNNALKIEKHLEKHQKLQPSHRKHR
IEHYIAAIQLCRDARANAINIFKLKYPYDNYYLFKSDAKTEAIKDDEGKAGPSEPVSLNGVTYDFSQNPTLEYDHRMSPV
FDRRIPEEYRRDAVDILEKIYDDEVKNRIFLKWDQEKRKQLMGDKAPNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43249; Mature: 43249

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLILISILISILPVSVFGEAVSSKAYKKRVELLLYLRAIEPIVRNYKGEVPGGQNQQN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TGATAANNQQTGGAPEQDGDRVKKYKELKRLYQEGLQYFFENNHVNAYRRFLEAQLGTEM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LLEELSQFYVERTEEILKSAIEKKNPNNPEDRNLVDIAIEWSKNSFIVRDMTANREAPLT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHH
RRMYNPRDFHYVTNKYAIEKNMEMGYKFLGLAKETRNNALKIEKHLEKHQKLQPSHRKHR
HHCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH
IEHYIAAIQLCRDARANAINIFKLKYPYDNYYLFKSDAKTEAIKDDEGKAGPSEPVSLNG
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCHHCCCCCCCCCCCCCCEEECC
VTYDFSQNPTLEYDHRMSPVFDRRIPEEYRRDAVDILEKIYDDEVKNRIFLKWDQEKRKQ
EEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHH
LMGDKAPNK
HCCCCCCCC
>Mature Secondary Structure
MKRLILISILISILPVSVFGEAVSSKAYKKRVELLLYLRAIEPIVRNYKGEVPGGQNQQN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TGATAANNQQTGGAPEQDGDRVKKYKELKRLYQEGLQYFFENNHVNAYRRFLEAQLGTEM
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LLEELSQFYVERTEEILKSAIEKKNPNNPEDRNLVDIAIEWSKNSFIVRDMTANREAPLT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHH
RRMYNPRDFHYVTNKYAIEKNMEMGYKFLGLAKETRNNALKIEKHLEKHQKLQPSHRKHR
HHCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHH
IEHYIAAIQLCRDARANAINIFKLKYPYDNYYLFKSDAKTEAIKDDEGKAGPSEPVSLNG
HHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEEEECCCCHHCCCCCCCCCCCCCCEEECC
VTYDFSQNPTLEYDHRMSPVFDRRIPEEYRRDAVDILEKIYDDEVKNRIFLKWDQEKRKQ
EEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHH
LMGDKAPNK
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA