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The map label for this gene is rcp1 [H]

Identifier: 45657085

GI number: 45657085

Start: 1480899

End: 1481357

Strand: Direct

Name: rcp1 [H]

Synonym: LIC11201

Alternate gene names: 45657085

Gene position: 1480899-1481357 (Clockwise)

Preceding gene: 45657084

Following gene: 45657086

Centisome position: 34.62

GC content: 36.38

Gene sequence:

>459_bases
ATGAAAGCTGAAATTAAAAATCAAAAAACAATTCATATACTCGTTGCGGAGGATGATCCGGACGATCGTTTATTAATGAA
AGACGGTTTTCGAGAAAATAATTTAGCCAATCCTCTACATTTCGTAAAGGATGGCGAAGAGTTGTTCGAATTCCTTCGGA
ATGAAGGAGAATATTCTGATATTCTAAAATATCCTAAGCCAGGAATCATTTTATTGGATTTGAATATGCCCAGAATGGAC
GGAAGAGAAGCTTTGAAAACGATCAAATCTATTCCGGAGTTAAAAAAAATTCCGGTTATCGTTTTGACTACTTCCAGAGA
GGAAGAAGATATGTTTAAAACTTACGACTTAGGAGCTAATTCCTTTATTCGAAAACCGGTCGAATTTGAAGCTTTTTTAG
AAACGATTCGAGCCCTCGGAAAATACTGGCTTGAAATCGTGGAGCTTCCAGTTGTTTAG

Upstream 100 bases:

>100_bases
TATAGAACTTCACGGAGGTAGAATTTACGCCAAGAGTACACTTCGGAAAGGTTCCACTTTTTATTTAGAGTTTCCAGGTA
AACTTGAGTCGGATTGAATT

Downstream 100 bases:

>100_bases
CGATGAGATTTCGGTTTGTTTGATTGAGGACGATGACGAAGATGCGATTCTTTTTCGGGAATATTTAGAAGAGATTCCGT
TTCCGAAATACAAAGTCACA

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MKAEIKNQKTIHILVAEDDPDDRLLMKDGFRENNLANPLHFVKDGEELFEFLRNEGEYSDILKYPKPGIILLDLNMPRMD
GREALKTIKSIPELKKIPVIVLTTSREEEDMFKTYDLGANSFIRKPVEFEAFLETIRALGKYWLEIVELPVV

Sequences:

>Translated_152_residues
MKAEIKNQKTIHILVAEDDPDDRLLMKDGFRENNLANPLHFVKDGEELFEFLRNEGEYSDILKYPKPGIILLDLNMPRMD
GREALKTIKSIPELKKIPVIVLTTSREEEDMFKTYDLGANSFIRKPVEFEAFLETIRALGKYWLEIVELPVV
>Mature_152_residues
MKAEIKNQKTIHILVAEDDPDDRLLMKDGFRENNLANPLHFVKDGEELFEFLRNEGEYSDILKYPKPGIILLDLNMPRMD
GREALKTIKSIPELKKIPVIVLTTSREEEDMFKTYDLGANSFIRKPVEFEAFLETIRALGKYWLEIVELPVV

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: 2.7.3.-

Molecular weight: Translated: 17666; Mature: 17666

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAEIKNQKTIHILVAEDDPDDRLLMKDGFRENNLANPLHFVKDGEELFEFLRNEGEYSD
CCCCCCCCCEEEEEEECCCCCCEEHCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCHHH
ILKYPKPGIILLDLNMPRMDGREALKTIKSIPELKKIPVIVLTTSREEEDMFKTYDLGAN
HHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHCCEEEEECCCCHHHHHHHHCCCCH
SFIRKPVEFEAFLETIRALGKYWLEIVELPVV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKAEIKNQKTIHILVAEDDPDDRLLMKDGFRENNLANPLHFVKDGEELFEFLRNEGEYSD
CCCCCCCCCEEEEEEECCCCCCEEHCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCCHHH
ILKYPKPGIILLDLNMPRMDGREALKTIKSIPELKKIPVIVLTTSREEEDMFKTYDLGAN
HHHCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHCCEEEEECCCCHHHHHHHHCCCCH
SFIRKPVEFEAFLETIRALGKYWLEIVELPVV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]