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The map label for this gene is yebA [H]

Identifier: 45657033

GI number: 45657033

Start: 1418081

End: 1418896

Strand: Direct

Name: yebA [H]

Synonym: LIC11149

Alternate gene names: 45657033

Gene position: 1418081-1418896 (Clockwise)

Preceding gene: 45657032

Following gene: 45657034

Centisome position: 33.15

GC content: 40.07

Gene sequence:

>816_bases
TTGGCGACATATTTTGGAAGAAACGAAATGAAAAGAAAAACCGGTTATATACTGGCGGGATTCCTTGTGATGGGGCTGTT
CTTCAGCATTAGATCCTTTGCCAATACAAATCTCGAAGAAATTAAATTGGATAATCAATACCTTCAAACCTATAGAGGTC
AAGAAGGGATTTGGATCGTTCCCAACCGAGTCAAAGAATCGATAGGGGATTTGATTCATAATTTCGGAACGACCGAACAC
GAAATCAAAAGGATCAATGGAATTCCGGACAACACAAGAATTCCGCTCACTGAGCCTGTATTTTTTCCTTATAATGAAAA
CTTTATTAGAAGTCTTTTACTGGAAGATAAAGGACGCGAAATATTTAGATCCGATCAGAGGGAATTTATTTGGCCGATCA
GTTTTAAACATTCGTTTGTAACCTCTCGATTAGGAAGAAGATGGAACGCAATGCATTCCGGAGTAGATATAGCCTGTCCA
ACAGGGTCCATCGTTATTGCCGCTGCGGACGGAGTGGTTTTGGAATCTAAAAAAGACGGTGGTTATGGAAATAAGATTCT
ACTTTCTCATCCTGGAATCAACGGAATTAATACGCTCTACGCACATAATTCTGTTCTTTATGTAAAAGAAGGGGATAAAG
TAAAAAAGGGGCAGATCATCGCACTTTCTGGAAATACGGGTCATACTACGGGACCTCACTTACATTTTGAAGTTCGTTAT
CAAAACGTAGTGTTAAATCCAGAACATTATCTTCCAGTCTTTCAATCTTCTTCCGAGGCTCGCGTGGCGATTGCCCGGGA
GACGATTGAAGAATAA

Upstream 100 bases:

>100_bases
AAAAATCCTTGAATGGAATTCTAAAATCAGAAGACTGACTTCAGAAGTTGTTTTCCGTTGCCGAAGTTCCATTTAGGTCT
CGGGTTTCCTGAGGTTTTCT

Downstream 100 bases:

>100_bases
GTGACCCTCACGCGGGATTTTTGGAATCCTGAACTTTATGATATTCTAATGCAGTTGCGGCCAGGGACGGCCGCATTCGA
TTTTGATAATACTCTTATAA

Product: membrane metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MATYFGRNEMKRKTGYILAGFLVMGLFFSIRSFANTNLEEIKLDNQYLQTYRGQEGIWIVPNRVKESIGDLIHNFGTTEH
EIKRINGIPDNTRIPLTEPVFFPYNENFIRSLLLEDKGREIFRSDQREFIWPISFKHSFVTSRLGRRWNAMHSGVDIACP
TGSIVIAAADGVVLESKKDGGYGNKILLSHPGINGINTLYAHNSVLYVKEGDKVKKGQIIALSGNTGHTTGPHLHFEVRY
QNVVLNPEHYLPVFQSSSEARVAIARETIEE

Sequences:

>Translated_271_residues
MATYFGRNEMKRKTGYILAGFLVMGLFFSIRSFANTNLEEIKLDNQYLQTYRGQEGIWIVPNRVKESIGDLIHNFGTTEH
EIKRINGIPDNTRIPLTEPVFFPYNENFIRSLLLEDKGREIFRSDQREFIWPISFKHSFVTSRLGRRWNAMHSGVDIACP
TGSIVIAAADGVVLESKKDGGYGNKILLSHPGINGINTLYAHNSVLYVKEGDKVKKGQIIALSGNTGHTTGPHLHFEVRY
QNVVLNPEHYLPVFQSSSEARVAIARETIEE
>Mature_270_residues
ATYFGRNEMKRKTGYILAGFLVMGLFFSIRSFANTNLEEIKLDNQYLQTYRGQEGIWIVPNRVKESIGDLIHNFGTTEHE
IKRINGIPDNTRIPLTEPVFFPYNENFIRSLLLEDKGREIFRSDQREFIWPISFKHSFVTSRLGRRWNAMHSGVDIACPT
GSIVIAAADGVVLESKKDGGYGNKILLSHPGINGINTLYAHNSVLYVKEGDKVKKGQIIALSGNTGHTTGPHLHFEVRYQ
NVVLNPEHYLPVFQSSSEARVAIARETIEE

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=98, Percent_Identity=44.8979591836735, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1789099, Length=125, Percent_Identity=40.8, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082174, Length=130, Percent_Identity=36.1538461538462, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 30683; Mature: 30552

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATYFGRNEMKRKTGYILAGFLVMGLFFSIRSFANTNLEEIKLDNQYLQTYRGQEGIWIV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECHHHHHHHCCCCCEEEC
PNRVKESIGDLIHNFGTTEHEIKRINGIPDNTRIPLTEPVFFPYNENFIRSLLLEDKGRE
CHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCH
IFRSDQREFIWPISFKHSFVTSRLGRRWNAMHSGVDIACPTGSIVIAAADGVVLESKKDG
HHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCEEEECCCCC
GYGNKILLSHPGINGINTLYAHNSVLYVKEGDKVKKGQIIALSGNTGHTTGPHLHFEVRY
CCCCEEEEECCCCCCCEEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEE
QNVVLNPEHYLPVFQSSSEARVAIARETIEE
EEEEECCHHCCCEECCCCCCEEEEEHHHHCC
>Mature Secondary Structure 
ATYFGRNEMKRKTGYILAGFLVMGLFFSIRSFANTNLEEIKLDNQYLQTYRGQEGIWIV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECHHHHHHHCCCCCEEEC
PNRVKESIGDLIHNFGTTEHEIKRINGIPDNTRIPLTEPVFFPYNENFIRSLLLEDKGRE
CHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCH
IFRSDQREFIWPISFKHSFVTSRLGRRWNAMHSGVDIACPTGSIVIAAADGVVLESKKDG
HHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCEEEECCCCC
GYGNKILLSHPGINGINTLYAHNSVLYVKEGDKVKKGQIIALSGNTGHTTGPHLHFEVRY
CCCCEEEEECCCCCCCEEEEECCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEEE
QNVVLNPEHYLPVFQSSSEARVAIARETIEE
EEEEECCHHCCCEECCCCCCEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]