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The map label for this gene is yobV [H]

Identifier: 45657030

GI number: 45657030

Start: 1413750

End: 1414703

Strand: Direct

Name: yobV [H]

Synonym: LIC11146

Alternate gene names: 45657030

Gene position: 1413750-1414703 (Clockwise)

Preceding gene: 45657027

Following gene: 45657031

Centisome position: 33.05

GC content: 35.43

Gene sequence:

>954_bases
ATGCGCGCAGATAGGCTTCTTTCCATACTTTTACAACTACAAGCAAAAGGTAGGATTTCATCCAGAGACCTGGCAAAAAA
ATTAGAAGTCTCTGAAAGAACAATTCACAGAGACATGGAAGCCTTGAGCGCTTCTGGAATACCTGTGTATGCGGAGCGAG
GATCTAAAGGAGGTTGGGAATTATCGGAAGGTTATAGAACCAATCTTACCGGAATGAAGAAGGAAGAGATTTTTTCAATG
ATTCTCACAAGTTCTACTCGAATTGCATCCGATCTCGGAAGAAAAAAAGATTTAGATTCGGCCCTTATGAAATTTATGGC
TTCACTTCCTCCCGCTTATCAGAAGGAAGCAGAGATGGTTCGACAAAGAATATATGTAGATGGTGCCGGTTGGAGTTGCT
CAGAAGAGGAGCTTCCTTTTTTATCTCTTATACAAGAAGCGGTCTGGCAAGGAAAGAAAATTGTTTTGAGATACAAAACG
GATGAAGAATCTAAAAAAAGAAACGTTTCCCCTTTGGGACTTGTAGCAAAAGGAAAAATTTGGTATTTGGTAGCAAAATA
TGAAAAAGAGTTTAGGACTTTTCGAGTTTCAAGAATTGTAGAGGCCAAGTTAGGAGATTCTTTTGAAAGACCAAAGAGAT
TCGATTTAGAAAAATATTGGAAAGATAGCACACAAAATTTTTTATCTAAAATACCGTCTTATCCGGTACGTTTTAAGATT
CATGTTTCAAAAATTGATTTTTTAAAAAATATATTGTACATAAGAATATTAAAATATTCAAAAATAAATAAGGATTGGAT
AGAAGTAATAGCGGATCTTGAAACTAGAGAATGGGCGTTACATCATATTTTAGGTTTAGGAGATTCTGTGGTTTTATGGG
AGCCGGAGGAATTGCGAGAGTCTATCTTGATTTCTGTAAGAAAAATTTTAGATTCTTATTCTAAAAACTTGTAA

Upstream 100 bases:

>100_bases
TAAAATAAAAATCAGTCTTATCATAATCAAAAAGATTTGTATTGAAATTAAAAATTATATATGACATATTTTGTCTTATA
TTGAATGATAAGCTTGAAAC

Downstream 100 bases:

>100_bases
TAGAGTTGTTAAAAATTTATTTTTCTTTCGTTTCTTTTGTTTTACACATGCTTATAAAAATAAAAACTATATGTCGATTT
GTCCCCAATAATTTTTTAAA

Product: DeoR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MRADRLLSILLQLQAKGRISSRDLAKKLEVSERTIHRDMEALSASGIPVYAERGSKGGWELSEGYRTNLTGMKKEEIFSM
ILTSSTRIASDLGRKKDLDSALMKFMASLPPAYQKEAEMVRQRIYVDGAGWSCSEEELPFLSLIQEAVWQGKKIVLRYKT
DEESKKRNVSPLGLVAKGKIWYLVAKYEKEFRTFRVSRIVEAKLGDSFERPKRFDLEKYWKDSTQNFLSKIPSYPVRFKI
HVSKIDFLKNILYIRILKYSKINKDWIEVIADLETREWALHHILGLGDSVVLWEPEELRESILISVRKILDSYSKNL

Sequences:

>Translated_317_residues
MRADRLLSILLQLQAKGRISSRDLAKKLEVSERTIHRDMEALSASGIPVYAERGSKGGWELSEGYRTNLTGMKKEEIFSM
ILTSSTRIASDLGRKKDLDSALMKFMASLPPAYQKEAEMVRQRIYVDGAGWSCSEEELPFLSLIQEAVWQGKKIVLRYKT
DEESKKRNVSPLGLVAKGKIWYLVAKYEKEFRTFRVSRIVEAKLGDSFERPKRFDLEKYWKDSTQNFLSKIPSYPVRFKI
HVSKIDFLKNILYIRILKYSKINKDWIEVIADLETREWALHHILGLGDSVVLWEPEELRESILISVRKILDSYSKNL
>Mature_317_residues
MRADRLLSILLQLQAKGRISSRDLAKKLEVSERTIHRDMEALSASGIPVYAERGSKGGWELSEGYRTNLTGMKKEEIFSM
ILTSSTRIASDLGRKKDLDSALMKFMASLPPAYQKEAEMVRQRIYVDGAGWSCSEEELPFLSLIQEAVWQGKKIVLRYKT
DEESKKRNVSPLGLVAKGKIWYLVAKYEKEFRTFRVSRIVEAKLGDSFERPKRFDLEKYWKDSTQNFLSKIPSYPVRFKI
HVSKIDFLKNILYIRILKYSKINKDWIEVIADLETREWALHHILGLGDSVVLWEPEELRESILISVRKILDSYSKNL

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36773; Mature: 36773

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00894 HTH_DEOR_1 ; PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRADRLLSILLQLQAKGRISSRDLAKKLEVSERTIHRDMEALSASGIPVYAERGSKGGWE
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
LSEGYRTNLTGMKKEEIFSMILTSSTRIASDLGRKKDLDSALMKFMASLPPAYQKEAEMV
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHH
RQRIYVDGAGWSCSEEELPFLSLIQEAVWQGKKIVLRYKTDEESKKRNVSPLGLVAKGKI
HHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCCCCEEECCCE
WYLVAKYEKEFRTFRVSRIVEAKLGDSFERPKRFDLEKYWKDSTQNFLSKIPSYPVRFKI
EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
HVSKIDFLKNILYIRILKYSKINKDWIEVIADLETREWALHHILGLGDSVVLWEPEELRE
EHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECHHHHHH
SILISVRKILDSYSKNL
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRADRLLSILLQLQAKGRISSRDLAKKLEVSERTIHRDMEALSASGIPVYAERGSKGGWE
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
LSEGYRTNLTGMKKEEIFSMILTSSTRIASDLGRKKDLDSALMKFMASLPPAYQKEAEMV
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHH
RQRIYVDGAGWSCSEEELPFLSLIQEAVWQGKKIVLRYKTDEESKKRNVSPLGLVAKGKI
HHHHEECCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHCCCCCCCEEECCCE
WYLVAKYEKEFRTFRVSRIVEAKLGDSFERPKRFDLEKYWKDSTQNFLSKIPSYPVRFKI
EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEE
HVSKIDFLKNILYIRILKYSKINKDWIEVIADLETREWALHHILGLGDSVVLWEPEELRE
EHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECHHHHHH
SILISVRKILDSYSKNL
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]