Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_005823 |
Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is yuxK [H]
Identifier: 45657002
GI number: 45657002
Start: 1380629
End: 1381045
Strand: Direct
Name: yuxK [H]
Synonym: LIC11118
Alternate gene names: 45657002
Gene position: 1380629-1381045 (Clockwise)
Preceding gene: 45657001
Following gene: 45657004
Centisome position: 32.28
GC content: 32.85
Gene sequence:
>417_bases ATGCAATCTGAAGTTTTTAAAGATCCAATCGTATTTTTTGATGGAATATGCAATCTTTGTAATTCTGTTGTTTTGTTTTT TCTGGATCGAAATCGAAAAGGGAATTTAAAATTTGCGAGTCTACAGTCTATGGCTGCGGAAAGAATTCTTGGAAAAAAAG TAGGTTTGAACGATTCTCCTTCTTCGGTTTTATTTCTAGAAGATGGAATCCTTTATCAAAAGTCGAATGCGATTTTAAAG ATCAGCGCTCATCTTTGTTTTCCTTGGAATATTTTTCCTTTATTTAAATGGGTGCCGGGTTGTATTCGTGATTATATTTA TGATTGGATTGCAAGAAATCGTTATCGTTGGTTTGGAAGATTAGAAATATGTAGGATACCGGATCCAAGTTTAAAACATA GATTTTTAGATGACTGA
Upstream 100 bases:
>100_bases AAATTAAAAAATGCCCTTTATAAATTTAAAAAATAAATCTTATAATTTTTCTTATTTATTTTTGAATGGTTAGGCACACT GAGGTGGTCTATAAAATAGA
Downstream 100 bases:
>100_bases AAGAATTACCCCGAAACTCATTTTTGATTTGTAAAATCGTTTTGGCAGTTTTGCTAATTCTTAGTTAACGTGAATTTGAT TTAGAGATTTGTTTTCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MQSEVFKDPIVFFDGICNLCNSVVLFFLDRNRKGNLKFASLQSMAAERILGKKVGLNDSPSSVLFLEDGILYQKSNAILK ISAHLCFPWNIFPLFKWVPGCIRDYIYDWIARNRYRWFGRLEICRIPDPSLKHRFLDD
Sequences:
>Translated_138_residues MQSEVFKDPIVFFDGICNLCNSVVLFFLDRNRKGNLKFASLQSMAAERILGKKVGLNDSPSSVLFLEDGILYQKSNAILK ISAHLCFPWNIFPLFKWVPGCIRDYIYDWIARNRYRWFGRLEICRIPDPSLKHRFLDD >Mature_138_residues MQSEVFKDPIVFFDGICNLCNSVVLFFLDRNRKGNLKFASLQSMAAERILGKKVGLNDSPSSVLFLEDGILYQKSNAILK ISAHLCFPWNIFPLFKWVPGCIRDYIYDWIARNRYRWFGRLEICRIPDPSLKHRFLDD
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCC thiol-disulfide oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007263 [H]
Pfam domain/function: PF04134 DUF393 [H]
EC number: NA
Molecular weight: Translated: 16153; Mature: 16153
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSEVFKDPIVFFDGICNLCNSVVLFFLDRNRKGNLKFASLQSMAAERILGKKVGLNDSP CCCCHHCCHHHHHHHHHHHHHHHEEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCC SSVLFLEDGILYQKSNAILKISAHLCFPWNIFPLFKWVPGCIRDYIYDWIARNRYRWFGR CEEEEEECCEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECE LEICRIPDPSLKHRFLDD EEEEECCCCHHCCCCCCC >Mature Secondary Structure MQSEVFKDPIVFFDGICNLCNSVVLFFLDRNRKGNLKFASLQSMAAERILGKKVGLNDSP CCCCHHCCHHHHHHHHHHHHHHHEEEEECCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCC SSVLFLEDGILYQKSNAILKISAHLCFPWNIFPLFKWVPGCIRDYIYDWIARNRYRWFGR CEEEEEECCEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECE LEICRIPDPSLKHRFLDD EEEEECCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7961491; 9274030; 9384377 [H]