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The map label for this gene is tnhA [H]

Identifier: 45656889

GI number: 45656889

Start: 1219982

End: 1220170

Strand: Direct

Name: tnhA [H]

Synonym: LIC11002

Alternate gene names: 45656889

Gene position: 1219982-1220170 (Clockwise)

Preceding gene: 45656888

Following gene: 45656895

Centisome position: 28.52

GC content: 38.62

Gene sequence:

>189_bases
TTGAATAACCTTCATTTTGAAAATGAGATCCTTCAGGAAACGTTTAACGACTATTACAGCCGGGTGAGAGTTCAAGAAGA
GAATCTCAAAGCGATGGATCAAAAGATTCAAGAGATCGCGGAAAGTGAACCGTTTAAAGAACGAGTGGGAATCTTAAGAT
GTTTTCGAGGAGTGGATTATTTAACGTGA

Upstream 100 bases:

>100_bases
GGATTTAGGAAGGAATCGTCAAAGGTTGATGAAGTTTCTATTAAGAAAAGGGAATGTATATTCAGCCACGAAATATTGAA
CAGTCAGTCATTACAAATGA

Downstream 100 bases:

>100_bases
GTTCGGCCTAAGAAAATTTTTCTAAAAGTAGTAGTTCCTACATTCATTTATAGAAATGATTGATCCTGATTTTTAAAGGC
TAAAAATAGTGGAGTTCCCA

Product: IS1533 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MNNLHFENEILQETFNDYYSRVRVQEENLKAMDQKIQEIAESEPFKERVGILRCFRGVDYLT

Sequences:

>Translated_62_residues
MNNLHFENEILQETFNDYYSRVRVQEENLKAMDQKIQEIAESEPFKERVGILRCFRGVDYLT
>Mature_62_residues
MNNLHFENEILQETFNDYYSRVRVQEENLKAMDQKIQEIAESEPFKERVGILRCFRGVDYLT

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7500; Mature: 7500

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLHFENEILQETFNDYYSRVRVQEENLKAMDQKIQEIAESEPFKERVGILRCFRGVDY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
LT
CC
>Mature Secondary Structure
MNNLHFENEILQETFNDYYSRVRVQEENLKAMDQKIQEIAESEPFKERVGILRCFRGVDY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
LT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8171119 [H]