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The map label for this gene is yahA [C]

Identifier: 45656884

GI number: 45656884

Start: 1213530

End: 1214423

Strand: Direct

Name: yahA [C]

Synonym: LIC10996

Alternate gene names: 45656884

Gene position: 1213530-1214423 (Clockwise)

Preceding gene: 45656882

Following gene: 45656885

Centisome position: 28.37

GC content: 32.44

Gene sequence:

>894_bases
ATGAAAGAAGTTTTTGATTTACCACCTAACGCTGATTTGTGGTCTTCGAAATCAACTTCGACAATCGATACACAAACTCT
TTTTTCGTTTAATGAAAAATATGAAATGGCTTTAGAAATATTAACTAAATTCGAAAACTTATCTATAGTTGATTCTTCAA
ATTTGAAAATTTCATCCACACAAAACTACGATGGAGAAATTCTTCCACAGCTGACTGAAATTTTGAAAACGGGAGACTTT
CATACGGAATATCAGCCGATTCTATCTTTAGAGACGGGAAAAATTTATGCGTATGAGGCCCTAGCCAGGTTCCGTATCAA
AGAAAAAAATATTTGTCCGGAGTTTGTATTTAACGAACTTCATCAAGATCCGGATCTATTCTTTGAATTTGAAAAAGAAT
TGAAACGATTCCAAATTCAGAATCGTCCACAAGGTAAACATCTATTTTTGAATCTGGATCCACACGTTTGTAAAAATCGT
TCACAGGCTGCCGAATGGCGAAAACTTTTAAGTAAGGAAAAAGATATAGTCTGTGAAATTATTGAAAATACTGATTCTAC
TTTAATCGAAAATACTCGATTTTGTTTGGATGTTTTAAGACGAGAAAATGTTCCAATTGCACTTGATGACGTAGGTGGAG
ATCAGAATCTTTTTTGTTTTAATTTTTTAGAATATTCTAAATTTATTAAGTTTGATAAATGTTGGTTGCGGCTTTTTGAA
ATTAAGCCATCTTATAAAAATATAGCTTGGGGTTTTTTGGATTTTGCAAAAGAATCTAATATACTGTGTATATTAGAAGG
AATCGAAACCTCTGAGGATTTTTTGATGGCTGCAGAAATGGGGTTTCCTCTGGCACAAGGGTATTTATTTCAATCTAGGA
ACGTTTTAGTTTAA

Upstream 100 bases:

>100_bases
TTAGGCATTTAAGTTCTAAATCGAGATTTTGAGTTTCAAACTCATTTGGGTTGACTCTAAAAACGCTACATTCTAAAATT
GAAAAAGGAGGTCTGTCCAT

Downstream 100 bases:

>100_bases
AATTTAATTTCGGGTGAATTACTACGAAAGTTGAGCGTTGTTTCTTTCTATTATAATATAATTTTATTTCACCCGATTTT
ACATTTTAAAAAAGTAAAAT

Product: putative diguanylate phosphodiesterase

Products: NA

Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; Signal Transduction Protein; EAL Domain-Containing Protein; EAL Domain Protein; EAL Domain Protein Diguanylate Phosphodiesterase; EALResponse Regulator Receiver

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKEVFDLPPNADLWSSKSTSTIDTQTLFSFNEKYEMALEILTKFENLSIVDSSNLKISSTQNYDGEILPQLTEILKTGDF
HTEYQPILSLETGKIYAYEALARFRIKEKNICPEFVFNELHQDPDLFFEFEKELKRFQIQNRPQGKHLFLNLDPHVCKNR
SQAAEWRKLLSKEKDIVCEIIENTDSTLIENTRFCLDVLRRENVPIALDDVGGDQNLFCFNFLEYSKFIKFDKCWLRLFE
IKPSYKNIAWGFLDFAKESNILCILEGIETSEDFLMAAEMGFPLAQGYLFQSRNVLV

Sequences:

>Translated_297_residues
MKEVFDLPPNADLWSSKSTSTIDTQTLFSFNEKYEMALEILTKFENLSIVDSSNLKISSTQNYDGEILPQLTEILKTGDF
HTEYQPILSLETGKIYAYEALARFRIKEKNICPEFVFNELHQDPDLFFEFEKELKRFQIQNRPQGKHLFLNLDPHVCKNR
SQAAEWRKLLSKEKDIVCEIIENTDSTLIENTRFCLDVLRRENVPIALDDVGGDQNLFCFNFLEYSKFIKFDKCWLRLFE
IKPSYKNIAWGFLDFAKESNILCILEGIETSEDFLMAAEMGFPLAQGYLFQSRNVLV
>Mature_297_residues
MKEVFDLPPNADLWSSKSTSTIDTQTLFSFNEKYEMALEILTKFENLSIVDSSNLKISSTQNYDGEILPQLTEILKTGDF
HTEYQPILSLETGKIYAYEALARFRIKEKNICPEFVFNELHQDPDLFFEFEKELKRFQIQNRPQGKHLFLNLDPHVCKNR
SQAAEWRKLLSKEKDIVCEIIENTDSTLIENTRFCLDVLRRENVPIALDDVGGDQNLFCFNFLEYSKFIKFDKCWLRLFE
IKPSYKNIAWGFLDFAKESNILCILEGIETSEDFLMAAEMGFPLAQGYLFQSRNVLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786507, Length=259, Percent_Identity=22.7799227799228, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34676; Mature: 34676

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEVFDLPPNADLWSSKSTSTIDTQTLFSFNEKYEMALEILTKFENLSIVDSSNLKISST
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCEEEECCCEEEECC
QNYDGEILPQLTEILKTGDFHTEYQPILSLETGKIYAYEALARFRIKEKNICPEFVFNEL
CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHCCCCCHHHHHHHH
HQDPDLFFEFEKELKRFQIQNRPQGKHLFLNLDPHVCKNRSQAAEWRKLLSKEKDIVCEI
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHCCCHHHHHHH
IENTDSTLIENTRFCLDVLRRENVPIALDDVGGDQNLFCFNFLEYSKFIKFDKCWLRLFE
HHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
IKPSYKNIAWGFLDFAKESNILCILEGIETSEDFLMAAEMGFPLAQGYLFQSRNVLV
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHEEHHHCCCCHHHCEEECCCCCCC
>Mature Secondary Structure
MKEVFDLPPNADLWSSKSTSTIDTQTLFSFNEKYEMALEILTKFENLSIVDSSNLKISST
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCEEEECCCEEEECC
QNYDGEILPQLTEILKTGDFHTEYQPILSLETGKIYAYEALARFRIKEKNICPEFVFNEL
CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCEEHHHHHHHHHHHCCCCCHHHHHHHH
HQDPDLFFEFEKELKRFQIQNRPQGKHLFLNLDPHVCKNRSQAAEWRKLLSKEKDIVCEI
CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHCCCHHHHHHH
IENTDSTLIENTRFCLDVLRRENVPIALDDVGGDQNLFCFNFLEYSKFIKFDKCWLRLFE
HHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH
IKPSYKNIAWGFLDFAKESNILCILEGIETSEDFLMAAEMGFPLAQGYLFQSRNVLV
CCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHEEHHHCCCCHHHCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA