Click here to switch to the map view.

The map label for this gene is 45656845

Identifier: 45656845

GI number: 45656845

Start: 1154115

End: 1154348

Strand: Direct

Name: 45656845

Synonym: LIC10957

Alternate gene names: NA

Gene position: 1154115-1154348 (Clockwise)

Preceding gene: 45656844

Following gene: 45656846

Centisome position: 26.98

GC content: 34.62

Gene sequence:

>234_bases
TTGTCTTATAAGAACGAAGTAATCATACCTTCTGAATATTTAAGAAGAACTGAAGCGAGAGCACATATTCAGAAAGAAAT
CTCGGAAAGACTTATACATTCTAATTTTTTTCGTTCTCCTAGGCCTGATTACGATTTAGTTCGTTACACGGAAGAAGCTA
CATGTAATACTTTTTTGCGCTATAGAATTCTTTCTCTAAAATCGGGAGAAGGATTGATCCGAGAAAGGATTTGA

Upstream 100 bases:

>100_bases
AACACATCTTCGGAAATAATCAATCATGGAATTTCCCTTTTCGAAACTAACAGAAACCTACCGGATACGGGTTACTGTCG
CTATTTATCGGGACAATATT

Downstream 100 bases:

>100_bases
TCGATGTAATTTCGGATTTTATCAAAAGCAATCTTTTGAAAATATCTATAAAATTCAAAGATAAAGATTTTCAAATTCAA
TTTTCTGATATGATCTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSYKNEVIIPSEYLRRTEARAHIQKEISERLIHSNFFRSPRPDYDLVRYTEEATCNTFLRYRILSLKSGEGLIRERI

Sequences:

>Translated_77_residues
MSYKNEVIIPSEYLRRTEARAHIQKEISERLIHSNFFRSPRPDYDLVRYTEEATCNTFLRYRILSLKSGEGLIRERI
>Mature_76_residues
SYKNEVIIPSEYLRRTEARAHIQKEISERLIHSNFFRSPRPDYDLVRYTEEATCNTFLRYRILSLKSGEGLIRERI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9278; Mature: 9147

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKNEVIIPSEYLRRTEARAHIQKEISERLIHSNFFRSPRPDYDLVRYTEEATCNTFLR
CCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHH
YRILSLKSGEGLIRERI
HHHHHCCCCCCHHHCCC
>Mature Secondary Structure 
SYKNEVIIPSEYLRRTEARAHIQKEISERLIHSNFFRSPRPDYDLVRYTEEATCNTFLR
CCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHH
YRILSLKSGEGLIRERI
HHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA