Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_005823 |
Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45656844
Identifier: 45656844
GI number: 45656844
Start: 1153886
End: 1154125
Strand: Direct
Name: 45656844
Synonym: LIC10956
Alternate gene names: NA
Gene position: 1153886-1154125 (Clockwise)
Preceding gene: 45656842
Following gene: 45656845
Centisome position: 26.98
GC content: 33.33
Gene sequence:
>240_bases ATGTTTTTACAAGTTCTTCATAAAAATGGAGTTTCTTTTACATTTGAGAGAACTGTCAAACTCTGTAAATTTCTTTCACG TATTTTTACGGGTCGAATTGATTTTGAGTCTTCTCAATCCGATAGTACAAACACATCTTCGGAAATAATCAATCATGGAA TTTCCCTTTTCGAAACTAACAGAAACCTACCGGATACGGGTTACTGTCGCTATTTATCGGGACAATATTTTGTCTTATAA
Upstream 100 bases:
>100_bases GAATACTCCCTCTTACTTAAGACAGTTTTGTAGAGAATTATAACTTCGTCATTCTCCTTTTTATCAGAGTAAAACCGATT CCAAAACTAAGTAAAAAACG
Downstream 100 bases:
>100_bases GAACGAAGTAATCATACCTTCTGAATATTTAAGAAGAACTGAAGCGAGAGCACATATTCAGAAAGAAATCTCGGAAAGAC TTATACATTCTAATTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MFLQVLHKNGVSFTFERTVKLCKFLSRIFTGRIDFESSQSDSTNTSSEIINHGISLFETNRNLPDTGYCRYLSGQYFVL
Sequences:
>Translated_79_residues MFLQVLHKNGVSFTFERTVKLCKFLSRIFTGRIDFESSQSDSTNTSSEIINHGISLFETNRNLPDTGYCRYLSGQYFVL >Mature_79_residues MFLQVLHKNGVSFTFERTVKLCKFLSRIFTGRIDFESSQSDSTNTSSEIINHGISLFETNRNLPDTGYCRYLSGQYFVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9107; Mature: 9107
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLQVLHKNGVSFTFERTVKLCKFLSRIFTGRIDFESSQSDSTNTSSEIINHGISLFETN CEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEECC RNLPDTGYCRYLSGQYFVL CCCCCCCCEEEECCEEEEC >Mature Secondary Structure MFLQVLHKNGVSFTFERTVKLCKFLSRIFTGRIDFESSQSDSTNTSSEIINHGISLFETN CEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCEEECC RNLPDTGYCRYLSGQYFVL CCCCCCCCEEEECCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA