Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_005823 |
Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45656801
Identifier: 45656801
GI number: 45656801
Start: 1096223
End: 1096609
Strand: Direct
Name: 45656801
Synonym: LIC10912
Alternate gene names: NA
Gene position: 1096223-1096609 (Clockwise)
Preceding gene: 45656799
Following gene: 45656802
Centisome position: 25.63
GC content: 34.88
Gene sequence:
>387_bases ATGATTCTAACCCTGATACATATAGGAATGACTCTTTCAATCTCTTGTTTTTACACTGGTTATTATTTTCGTTTTAGAAA AAATTCTCTGCATCGTATTTTCAATTTGTTTGGCACAATGTTCAACCTAACAACTGCCTTCTCACTTTTATACTTGAAGT ATTTAGGTGGCGGTTTAGAGAAAATTGGAATCTTTCCTGCTGTAGAACGCTGGATAATTGATACACATCGTGTATTCGCA TTATTGACCTTGGTTTTGATGCTTTTGATGGTTTGGTCTGGGATTACTCGAAAAAAAGAATTTCACAGAAAGCTACACTA TATTTTCCTTCCTCTATACACTGCTATTTTCCTTTCCGGTTTGGTATTGTTTCGTTCTTCGAACTGA
Upstream 100 bases:
>100_bases ATAGGCTATTCTCAACATTTCGGGAATGATTTCTTTTTTAATTTTAGAATTTACTTGAAAAAGAGTTTGGGCCGAGGTTC GTATGTCGAAAATAAAAAAG
Downstream 100 bases:
>100_bases CCTTATTCCGGCATCCTGTTTTGAGGTTGGGAATTGCATCATCTTATTCGCTTAGGAAAAATATGAACGAGATCAAAGAA ATTAAGAACTTTGCAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MILTLIHIGMTLSISCFYTGYYFRFRKNSLHRIFNLFGTMFNLTTAFSLLYLKYLGGGLEKIGIFPAVERWIIDTHRVFA LLTLVLMLLMVWSGITRKKEFHRKLHYIFLPLYTAIFLSGLVLFRSSN
Sequences:
>Translated_128_residues MILTLIHIGMTLSISCFYTGYYFRFRKNSLHRIFNLFGTMFNLTTAFSLLYLKYLGGGLEKIGIFPAVERWIIDTHRVFA LLTLVLMLLMVWSGITRKKEFHRKLHYIFLPLYTAIFLSGLVLFRSSN >Mature_128_residues MILTLIHIGMTLSISCFYTGYYFRFRKNSLHRIFNLFGTMFNLTTAFSLLYLKYLGGGLEKIGIFPAVERWIIDTHRVFA LLTLVLMLLMVWSGITRKKEFHRKLHYIFLPLYTAIFLSGLVLFRSSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15024; Mature: 15024
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILTLIHIGMTLSISCFYTGYYFRFRKNSLHRIFNLFGTMFNLTTAFSLLYLKYLGGGLE CEEEEEEHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KIGIFPAVERWIIDTHRVFALLTLVLMLLMVWSGITRKKEFHRKLHYIFLPLYTAIFLSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVLFRSSN HHHHCCCC >Mature Secondary Structure MILTLIHIGMTLSISCFYTGYYFRFRKNSLHRIFNLFGTMFNLTTAFSLLYLKYLGGGLE CEEEEEEHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH KIGIFPAVERWIIDTHRVFALLTLVLMLLMVWSGITRKKEFHRKLHYIFLPLYTAIFLSG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LVLFRSSN HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA