Click here to switch to the map view.

The map label for this gene is 45656793

Identifier: 45656793

GI number: 45656793

Start: 1087216

End: 1088334

Strand: Direct

Name: 45656793

Synonym: LIC10902

Alternate gene names: NA

Gene position: 1087216-1088334 (Clockwise)

Preceding gene: 45656792

Following gene: 45656797

Centisome position: 25.42

GC content: 36.19

Gene sequence:

>1119_bases
ATGAAAGATAAAATTCTTTCAGGTGATAAACCGATTTTATTTCTTCTTATATTTAATATCGTATTGTTTACGGGAGTATT
TATATACGATTATACTCGATACGGATATCAAGGTTCTCAAAAAGTAATTGGAACCATTCTTTATAAATCAAATACAACTC
GAAGAAAATATGACTCCGAAGTGGTCTGGAAAGAAATTGAAGTGGGAAATTCCGTTCAAAACAGAGATACAATTGTAACT
TCGGAGGGTTCTCAGGCAAAGATCAGACTTTTGGATGGAAGCGAGATTATGATCGCTGAAAACTCAATGATCTTTATAGA
TTATTTGGACAATCGTGCTAATTTAGAAATCTCGGCAGGTGGTTTACAAGTTACAAGGAAATCGGATAATAAAGAAAATA
CTTCTTCTTTGGGAATTCGTTCCGGTGACGGGGTGTTAAAACTTGTAGAAGGGGTTGTAAACGTAGAAAAGAAAAAGGAT
CAAAGAACTCTGGATTACGCGATTCTTTCCGGAGCGGTTAAACCTGATCCTAGCAATCCTTTTCCCATGTCGCCTAAAAA
ATCTTTGGACGGATTTGAGAAGTTATTTCCTGGATCGGAGAATATTCAGACTATTAAATCCATTCAAGCCGCCACTTCTG
CCGTAAATTCTAATTCGTCAGTTAACACAAATTCGGCGACTAATCCAGGTCCCCACGGTACTAATATTACCCCGTCTATA
AAATCTGAAAATACCACGACAAAATCACAAAACACGGGAACCGATTCACAATCTAAACCTGGTTTAAAAACAGAACGAAT
TGGTTCATCGGGAAACAAAAATCAAAACGAAGTCAATTCGAAAGCAGATTATGATCCGGGAGATTATATTAAAAAACAAA
AATATGAACATAAGGTTCAAGAGAAATCAGATTCTTCTGCAGTTCACCAAAATAAAACTGAGTTTAAACCTTCTGAGTCG
ACTCAGGCACCATCCAAAAGTGGTAGATCTTCTTATCCGGAAGTAAAAAAACAAAGACAAAATCGAGAATGGACTCCTGA
AGAATTACTTCGGCAAGAAAAAGAAAAACGCAGAAGAGAAAGGGAAGATAAAGAGCAAAGAGAATTTTTGAGAATGTAA

Upstream 100 bases:

>100_bases
TTTTAGGGCATTCTAAAGATAAAAATTGTCCTAAAAATTTGAAGGAGCTTAGAAAACAAATTGGAATGGAATTCAAATCT
GGCAGGTCTAAATAACGGGT

Downstream 100 bases:

>100_bases
AAATTAACTTTCATCCACATAAATGAAGATTGTTTTATGGCGATTTCTGGAACTTATCTAACGTGGTTTGATGTAAAAAA
ACGATTTATGAAAAATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MKDKILSGDKPILFLLIFNIVLFTGVFIYDYTRYGYQGSQKVIGTILYKSNTTRRKYDSEVVWKEIEVGNSVQNRDTIVT
SEGSQAKIRLLDGSEIMIAENSMIFIDYLDNRANLEISAGGLQVTRKSDNKENTSSLGIRSGDGVLKLVEGVVNVEKKKD
QRTLDYAILSGAVKPDPSNPFPMSPKKSLDGFEKLFPGSENIQTIKSIQAATSAVNSNSSVNTNSATNPGPHGTNITPSI
KSENTTTKSQNTGTDSQSKPGLKTERIGSSGNKNQNEVNSKADYDPGDYIKKQKYEHKVQEKSDSSAVHQNKTEFKPSES
TQAPSKSGRSSYPEVKKQRQNREWTPEELLRQEKEKRRREREDKEQREFLRM

Sequences:

>Translated_372_residues
MKDKILSGDKPILFLLIFNIVLFTGVFIYDYTRYGYQGSQKVIGTILYKSNTTRRKYDSEVVWKEIEVGNSVQNRDTIVT
SEGSQAKIRLLDGSEIMIAENSMIFIDYLDNRANLEISAGGLQVTRKSDNKENTSSLGIRSGDGVLKLVEGVVNVEKKKD
QRTLDYAILSGAVKPDPSNPFPMSPKKSLDGFEKLFPGSENIQTIKSIQAATSAVNSNSSVNTNSATNPGPHGTNITPSI
KSENTTTKSQNTGTDSQSKPGLKTERIGSSGNKNQNEVNSKADYDPGDYIKKQKYEHKVQEKSDSSAVHQNKTEFKPSES
TQAPSKSGRSSYPEVKKQRQNREWTPEELLRQEKEKRRREREDKEQREFLRM
>Mature_372_residues
MKDKILSGDKPILFLLIFNIVLFTGVFIYDYTRYGYQGSQKVIGTILYKSNTTRRKYDSEVVWKEIEVGNSVQNRDTIVT
SEGSQAKIRLLDGSEIMIAENSMIFIDYLDNRANLEISAGGLQVTRKSDNKENTSSLGIRSGDGVLKLVEGVVNVEKKKD
QRTLDYAILSGAVKPDPSNPFPMSPKKSLDGFEKLFPGSENIQTIKSIQAATSAVNSNSSVNTNSATNPGPHGTNITPSI
KSENTTTKSQNTGTDSQSKPGLKTERIGSSGNKNQNEVNSKADYDPGDYIKKQKYEHKVQEKSDSSAVHQNKTEFKPSES
TQAPSKSGRSSYPEVKKQRQNREWTPEELLRQEKEKRRREREDKEQREFLRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41706; Mature: 41706

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKILSGDKPILFLLIFNIVLFTGVFIYDYTRYGYQGSQKVIGTILYKSNTTRRKYDSE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCHHHCHH
VVWKEIEVGNSVQNRDTIVTSEGSQAKIRLLDGSEIMIAENSMIFIDYLDNRANLEISAG
HHHHHHHCCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCEEEECC
GLQVTRKSDNKENTSSLGIRSGDGVLKLVEGVVNVEKKKDQRTLDYAILSGAVKPDPSNP
CEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
FPMSPKKSLDGFEKLFPGSENIQTIKSIQAATSAVNSNSSVNTNSATNPGPHGTNITPSI
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
KSENTTTKSQNTGTDSQSKPGLKTERIGSSGNKNQNEVNSKADYDPGDYIKKQKYEHKVQ
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHH
EKSDSSAVHQNKTEFKPSESTQAPSKSGRSSYPEVKKQRQNREWTPEELLRQEKEKRRRE
HCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
REDKEQREFLRM
HHHHHHHHHHCC
>Mature Secondary Structure
MKDKILSGDKPILFLLIFNIVLFTGVFIYDYTRYGYQGSQKVIGTILYKSNTTRRKYDSE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCHHHCHH
VVWKEIEVGNSVQNRDTIVTSEGSQAKIRLLDGSEIMIAENSMIFIDYLDNRANLEISAG
HHHHHHHCCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCEEEECC
GLQVTRKSDNKENTSSLGIRSGDGVLKLVEGVVNVEKKKDQRTLDYAILSGAVKPDPSNP
CEEEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
FPMSPKKSLDGFEKLFPGSENIQTIKSIQAATSAVNSNSSVNTNSATNPGPHGTNITPSI
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
KSENTTTKSQNTGTDSQSKPGLKTERIGSSGNKNQNEVNSKADYDPGDYIKKQKYEHKVQ
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHH
EKSDSSAVHQNKTEFKPSESTQAPSKSGRSSYPEVKKQRQNREWTPEELLRQEKEKRRRE
HCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
REDKEQREFLRM
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA