Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45656726
Identifier: 45656726
GI number: 45656726
Start: 1014154
End: 1015041
Strand: Direct
Name: 45656726
Synonym: LIC10835
Alternate gene names: NA
Gene position: 1014154-1015041 (Clockwise)
Preceding gene: 45656725
Following gene: 45656727
Centisome position: 23.71
GC content: 30.18
Gene sequence:
>888_bases ATGAATCAAGAATGGACCCAGGATAATGAAAAGATTATTGAATATTTTAGAGGGCTTTTATTAGATACATCATCTAGTTT GGATTTATTTCAGAAAATTTTTTCTAAAGTCAAAGGTATCGAATATGTGGATGAAAACATTAAAGTAAAGCTTGTTAATG ATGTTTCAATTGAACTTACTGGACCGGCGGATAAAAAAGAAATAGAACAATGGCCTGAATCAGTTAAAAGAATATTCTCT GAACATGCAGCTATGGGTATCTGGAAAGGAGAAAATGTATTCGGCGGACAAATTGCTTTTGATAATAGAATTAACGTCAA AAATCTTGAGGAAACCCAATGGAAGGATGAAGATTATGATTTAAATAGTATCCAGTCACCTATAAGTGGCGGTGATGGAA GTTTTGTGTTTCATCCTGCTTTTAAAGATATGAATGGAGAGGTTCTTTGTCAGGTTATTGATGGTAAAATTAATGGGCCT TTAGCGCTTGGGCCAGGTTCCATATTTTTATGGATGATCGCAGGTTATATGGAAATAGATCGAGACATATCATTACCATT AATATCAAAGGATAAATTAATCAGTATTGCTCCAAAATCAACAAAGTCAGGAGTAATAAAATTAATTATGGAAAAATCCG GTTTATCAAAAGAACGAATAGATGATTTAATTAAGAAACTCGAAAATCTTTATGATTTACAGAAGAGTTTTAAAAAAGCT AATGATAAAAATCAATTTATAAAATTAGAATTAAAGTATTTGGATGATATCGAAGCTTACAAGAATGCTTTACCCGAAAG CCTACAATTCGATTTTACTATGATTCACGGATATAACATAAGTTGTTATAAAAATGAATTAGATGAATTATTAAAAAGAT ATAAATAA
Upstream 100 bases:
>100_bases AAGTCAAGACAGGTACTGTTGGAGCTTAAAAAGAAAGAAATGAGAAAAATATTGTGTTATTAATTTAGATTTATATTAGA ATATTATAAAAGGAAATAAA
Downstream 100 bases:
>100_bases CACACATAACTTCGGTTTCCCACTTTGCGATTTTGTAAAACCGTGGTCGTTAAGTTAAGCGGACGTTTCTGCAAACTTAA GGAAGACATCAATTTTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNQEWTQDNEKIIEYFRGLLLDTSSSLDLFQKIFSKVKGIEYVDENIKVKLVNDVSIELTGPADKKEIEQWPESVKRIFS EHAAMGIWKGENVFGGQIAFDNRINVKNLEETQWKDEDYDLNSIQSPISGGDGSFVFHPAFKDMNGEVLCQVIDGKINGP LALGPGSIFLWMIAGYMEIDRDISLPLISKDKLISIAPKSTKSGVIKLIMEKSGLSKERIDDLIKKLENLYDLQKSFKKA NDKNQFIKLELKYLDDIEAYKNALPESLQFDFTMIHGYNISCYKNELDELLKRYK
Sequences:
>Translated_295_residues MNQEWTQDNEKIIEYFRGLLLDTSSSLDLFQKIFSKVKGIEYVDENIKVKLVNDVSIELTGPADKKEIEQWPESVKRIFS EHAAMGIWKGENVFGGQIAFDNRINVKNLEETQWKDEDYDLNSIQSPISGGDGSFVFHPAFKDMNGEVLCQVIDGKINGP LALGPGSIFLWMIAGYMEIDRDISLPLISKDKLISIAPKSTKSGVIKLIMEKSGLSKERIDDLIKKLENLYDLQKSFKKA NDKNQFIKLELKYLDDIEAYKNALPESLQFDFTMIHGYNISCYKNELDELLKRYK >Mature_295_residues MNQEWTQDNEKIIEYFRGLLLDTSSSLDLFQKIFSKVKGIEYVDENIKVKLVNDVSIELTGPADKKEIEQWPESVKRIFS EHAAMGIWKGENVFGGQIAFDNRINVKNLEETQWKDEDYDLNSIQSPISGGDGSFVFHPAFKDMNGEVLCQVIDGKINGP LALGPGSIFLWMIAGYMEIDRDISLPLISKDKLISIAPKSTKSGVIKLIMEKSGLSKERIDDLIKKLENLYDLQKSFKKA NDKNQFIKLELKYLDDIEAYKNALPESLQFDFTMIHGYNISCYKNELDELLKRYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33796; Mature: 33796
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQEWTQDNEKIIEYFRGLLLDTSSSLDLFQKIFSKVKGIEYVDENIKVKLVNDVSIELT CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECCCCEEEEEECEEEEEE GPADKKEIEQWPESVKRIFSEHAAMGIWKGENVFGGQIAFDNRINVKNLEETQWKDEDYD CCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCCHHHCCCCCCCC LNSIQSPISGGDGSFVFHPAFKDMNGEVLCQVIDGKINGPLALGPGSIFLWMIAGYMEID HHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHC RDISLPLISKDKLISIAPKSTKSGVIKLIMEKSGLSKERIDDLIKKLENLYDLQKSFKKA CCCCCCEECCCCEEEECCCCCHHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC NDKNQFIKLELKYLDDIEAYKNALPESLQFDFTMIHGYNISCYKNELDELLKRYK CCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCEEHHHHHHHHHHHHCC >Mature Secondary Structure MNQEWTQDNEKIIEYFRGLLLDTSSSLDLFQKIFSKVKGIEYVDENIKVKLVNDVSIELT CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEECCCCEEEEEECEEEEEE GPADKKEIEQWPESVKRIFSEHAAMGIWKGENVFGGQIAFDNRINVKNLEETQWKDEDYD CCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEECCCCCCCCCHHHCCCCCCCC LNSIQSPISGGDGSFVFHPAFKDMNGEVLCQVIDGKINGPLALGPGSIFLWMIAGYMEID HHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHC RDISLPLISKDKLISIAPKSTKSGVIKLIMEKSGLSKERIDDLIKKLENLYDLQKSFKKA CCCCCCEECCCCEEEECCCCCHHHHHHEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC NDKNQFIKLELKYLDDIEAYKNALPESLQFDFTMIHGYNISCYKNELDELLKRYK CCCCCEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEECCCEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA