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The map label for this gene is yyaP [H]

Identifier: 45656725

GI number: 45656725

Start: 1013489

End: 1014082

Strand: Direct

Name: yyaP [H]

Synonym: LIC10834

Alternate gene names: 45656725

Gene position: 1013489-1014082 (Clockwise)

Preceding gene: 45656724

Following gene: 45656726

Centisome position: 23.7

GC content: 40.07

Gene sequence:

>594_bases
ATGAGGAAAATAACTGTTTTATCATTTATTACATTAGATGGAGTTATGCAAGCACCTGGTGGACCTGAGGAAGATACATC
GGGCGGTTTTAAATACGGCGGTTGGACTGCGCCGTATGAGGACGAAGTTTCTGGTAAGATCATGGAAAAACAGATGAAAC
CTGCAGATTATCTTTTGGGCAGAAAAACATTTGAGATCTTCGCCTCCTATTGGCCTGAACATGCAGACTTTTGGCCTGGT
ATCAATGAGGGCACAAAATACGTAATGTCCAAGACCGTGAAGAAATCAGATTGGAAAAACTCAGTATTCCTAGAAAGTTT
GGCGGATATTAAAAAACTCAAAAATTCAGAAGGTTCTGACATTCAAGTTTGGGGGAGTGGTGAACTCATTCAACTGTTAT
TTAAGAATGATTTAGTAGATGAGTTGTGGCTTAAAATATTTCCCGTTACGCTCAACACTGGCAAACGTTTGTTTGGCGAT
GGGATCATCCCTGTGGCATTTACATTAATAGAGAGTTCTGTTACACCAAGTGGAGTAATTATTGCTAATTACAAACGAGC
AGGAGAAGTCAAGACAGGTACTGTTGGAGCTTAA

Upstream 100 bases:

>100_bases
ACGAAAGCGTTTCAGGTGATGAGTGCGTTGGTTATGAAATTTGCGAGCGATTTACTTAAACAGTATTTACATTAACTTAT
ATTAGAGGAGTTGAAATCAT

Downstream 100 bases:

>100_bases
AAAGAAAGAAATGAGAAAAATATTGTGTTATTAATTTAGATTTATATTAGAATATTATAAAAGGAAATAAAATGAATCAA
GAATGGACCCAGGATAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRKITVLSFITLDGVMQAPGGPEEDTSGGFKYGGWTAPYEDEVSGKIMEKQMKPADYLLGRKTFEIFASYWPEHADFWPG
INEGTKYVMSKTVKKSDWKNSVFLESLADIKKLKNSEGSDIQVWGSGELIQLLFKNDLVDELWLKIFPVTLNTGKRLFGD
GIIPVAFTLIESSVTPSGVIIANYKRAGEVKTGTVGA

Sequences:

>Translated_197_residues
MRKITVLSFITLDGVMQAPGGPEEDTSGGFKYGGWTAPYEDEVSGKIMEKQMKPADYLLGRKTFEIFASYWPEHADFWPG
INEGTKYVMSKTVKKSDWKNSVFLESLADIKKLKNSEGSDIQVWGSGELIQLLFKNDLVDELWLKIFPVTLNTGKRLFGD
GIIPVAFTLIESSVTPSGVIIANYKRAGEVKTGTVGA
>Mature_197_residues
MRKITVLSFITLDGVMQAPGGPEEDTSGGFKYGGWTAPYEDEVSGKIMEKQMKPADYLLGRKTFEIFASYWPEHADFWPG
INEGTKYVMSKTVKKSDWKNSVFLESLADIKKLKNSEGSDIQVWGSGELIQLLFKNDLVDELWLKIFPVTLNTGKRLFGD
GIIPVAFTLIESSVTPSGVIIANYKRAGEVKTGTVGA

Specific function: Unknown

COG id: COG0262

COG function: function code H; Dihydrofolate reductase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywjB [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002734 [H]

Pfam domain/function: PF01872 RibD_C [H]

EC number: NA

Molecular weight: Translated: 21809; Mature: 21809

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS00052 RIBOSOMAL_S7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKITVLSFITLDGVMQAPGGPEEDTSGGFKYGGWTAPYEDEVSGKIMEKQMKPADYLLG
CCEEEEEEEEHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCHHHHHHH
RKTFEIFASYWPEHADFWPGINEGTKYVMSKTVKKSDWKNSVFLESLADIKKLKNSEGSD
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCE
IQVWGSGELIQLLFKNDLVDELWLKIFPVTLNTGKRLFGDGIIPVAFTLIESSVTPSGVI
EEEECCCHHHHHHHHHCHHHHHHHEEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCCEE
IANYKRAGEVKTGTVGA
EECCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKITVLSFITLDGVMQAPGGPEEDTSGGFKYGGWTAPYEDEVSGKIMEKQMKPADYLLG
CCEEEEEEEEHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHCCHHHHHHH
RKTFEIFASYWPEHADFWPGINEGTKYVMSKTVKKSDWKNSVFLESLADIKKLKNSEGSD
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCE
IQVWGSGELIQLLFKNDLVDELWLKIFPVTLNTGKRLFGDGIIPVAFTLIESSVTPSGVI
EEEECCCHHHHHHHHHCHHHHHHHEEEEEEECCCCHHHCCCHHHHHHHHHHCCCCCCCEE
IANYKRAGEVKTGTVGA
EECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]