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The map label for this gene is cbiM [H]

Identifier: 45359044

GI number: 45359044

Start: 1442205

End: 1442882

Strand: Direct

Name: cbiM [H]

Synonym: MMP1481

Alternate gene names: 45359044

Gene position: 1442205-1442882 (Clockwise)

Preceding gene: 45359043

Following gene: 45359045

Centisome position: 86.82

GC content: 39.09

Gene sequence:

>678_bases
GTGCACATTATGGAAGGTTTTTTGCCTCCGATGTGGGCCGCATTTTGGTTTGTACTCTCTGGAATTGTTGTTATATATGG
AATAATCCAGTTAAATAAATTAATAAACAATAAACCTGAAGTTAAACCTACATTAGCCCTCGCAGGAGCATTTATGTTCA
TATTAAGTTCGCTAAAACTTCCTTCAGTTACAGGAAGCTGTTCACACCCAACAGGTGGTGGACTAGGCGCAATCATGTTT
GGTCCCGCAATTACAGCGGTACTCGCAACAATTGTATTATTGTTCCAGGCAATCTTACTTGCACACGGTGGATTAACCAC
ATTAGGAGCAAATATATTTTCAATGGGTATTATGGGCCCAGCAATTGGTTTTTTAGTGTTTAAATTGTTAAAAGGAAAAT
TAAATATCACATGGGTTGTTGTACTCGCTGCAATATTTGCAGACTGGGGAACATACGCTACTACATCAGTACAGCTCGCG
TTAGCATACCCACTACCAGATTTTGGAACGGCTCTTGCAAACTTTGGAACCGTATTTGCAGTAACACAAATTCCACTTGC
AATTATGGAAGGTCTATTAACAGGACTTATCTGGGATTACATTATGAAATTAAGACCCGATCTCCTTGCAAAACTTGGTC
TTATTGACCTTGAAAAAGCAAAAGGAGGTGCTGAATAA

Upstream 100 bases:

>100_bases
ATTTAGTAAAATAATCTGGAATTAAATCGAAATCCATATATATCAAACCAAGTTAAAGATAACTGTAAAACAATATAACT
TATCTTTAATAGGTGGTAAA

Downstream 100 bases:

>100_bases
TGGAATTTAAACACGTCTTGATGATTCTTGGAGTTATAATTCTTACATTAGCACCTTTGATTATGTATTCTGGTCTTGGT
GAAGATGAAGGCTACTTCGG

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MHIMEGFLPPMWAAFWFVLSGIVVIYGIIQLNKLINNKPEVKPTLALAGAFMFILSSLKLPSVTGSCSHPTGGGLGAIMF
GPAITAVLATIVLLFQAILLAHGGLTTLGANIFSMGIMGPAIGFLVFKLLKGKLNITWVVVLAAIFADWGTYATTSVQLA
LAYPLPDFGTALANFGTVFAVTQIPLAIMEGLLTGLIWDYIMKLRPDLLAKLGLIDLEKAKGGAE

Sequences:

>Translated_225_residues
MHIMEGFLPPMWAAFWFVLSGIVVIYGIIQLNKLINNKPEVKPTLALAGAFMFILSSLKLPSVTGSCSHPTGGGLGAIMF
GPAITAVLATIVLLFQAILLAHGGLTTLGANIFSMGIMGPAIGFLVFKLLKGKLNITWVVVLAAIFADWGTYATTSVQLA
LAYPLPDFGTALANFGTVFAVTQIPLAIMEGLLTGLIWDYIMKLRPDLLAKLGLIDLEKAKGGAE
>Mature_225_residues
MHIMEGFLPPMWAAFWFVLSGIVVIYGIIQLNKLINNKPEVKPTLALAGAFMFILSSLKLPSVTGSCSHPTGGGLGAIMF
GPAITAVLATIVLLFQAILLAHGGLTTLGANIFSMGIMGPAIGFLVFKLLKGKLNITWVVVLAAIFADWGTYATTSVQLA
LAYPLPDFGTALANFGTVFAVTQIPLAIMEGLLTGLIWDYIMKLRPDLLAKLGLIDLEKAKGGAE

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 23833; Mature: 23833

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIMEGFLPPMWAAFWFVLSGIVVIYGIIQLNKLINNKPEVKPTLALAGAFMFILSSLKL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PSVTGSCSHPTGGGLGAIMFGPAITAVLATIVLLFQAILLAHGGLTTLGANIFSMGIMGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AIGFLVFKLLKGKLNITWVVVLAAIFADWGTYATTSVQLALAYPLPDFGTALANFGTVFA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHEEEEEECCCCHHHHHHHHHHHHHH
VTQIPLAIMEGLLTGLIWDYIMKLRPDLLAKLGLIDLEKAKGGAE
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHCCCCCC
>Mature Secondary Structure
MHIMEGFLPPMWAAFWFVLSGIVVIYGIIQLNKLINNKPEVKPTLALAGAFMFILSSLKL
CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PSVTGSCSHPTGGGLGAIMFGPAITAVLATIVLLFQAILLAHGGLTTLGANIFSMGIMGP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
AIGFLVFKLLKGKLNITWVVVLAAIFADWGTYATTSVQLALAYPLPDFGTALANFGTVFA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHEEEEEECCCCHHHHHHHHHHHHHH
VTQIPLAIMEGLLTGLIWDYIMKLRPDLLAKLGLIDLEKAKGGAE
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]