Click here to switch to the map view.

The map label for this gene is 45358956

Identifier: 45358956

GI number: 45358956

Start: 1372554

End: 1372970

Strand: Direct

Name: 45358956

Synonym: MMP1393

Alternate gene names: NA

Gene position: 1372554-1372970 (Clockwise)

Preceding gene: 45358950

Following gene: 45358960

Centisome position: 82.63

GC content: 31.18

Gene sequence:

>417_bases
ATGGCTTTTGAATTTACAATTTACGCAAAAGGACACGAAAATATCAGCGCAAATCACAAAAGTACACTTGAAATAACAAA
AGAAAACCACGTGACGTGTACTGGCGACTGCATCGTTGGAATTTCTGCGGATAAATCAATGCTCGATTTTTCGGAAAGTT
TTAAAGAAAATTTAAGAAATTCGGATAAAATTACTGTTGAAATTGAAGTTGAAGGATTAAAAGAAGTAATTACAGGACGC
GGAAACTCAAAATTAACACTTGACCATAAAACCGATATCGTAATTAGAACGAGTGACTTTTCATGCAGTAGAACGTTAAT
GGTAAATTCAAATAAAGCTTCAAAAGACATAAACCGTGAAATTGTTGAAAAATTAAAAAAAGGAGCAGATTTGAAATTTA
AAATAATTGTTGAATAA

Upstream 100 bases:

>100_bases
TCGTAGTTTATACTTAAATAAAAGAATAAGTTTATTTAATTAAAAACTTTATTACTCCAAAGTATTAATCTTTACCGTTT
TTGGTATTTGGGTGAAAATA

Downstream 100 bases:

>100_bases
ATTTAGTTTATTAATTTTAAGATTTCTTTTAATTTTTTAACATCAACCTGTCCCGGAGCTGATGCTTTTCCCCCCATTGA
TGCAAAGGTTAGTATTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MAFEFTIYAKGHENISANHKSTLEITKENHVTCTGDCIVGISADKSMLDFSESFKENLRNSDKITVEIEVEGLKEVITGR
GNSKLTLDHKTDIVIRTSDFSCSRTLMVNSNKASKDINREIVEKLKKGADLKFKIIVE

Sequences:

>Translated_138_residues
MAFEFTIYAKGHENISANHKSTLEITKENHVTCTGDCIVGISADKSMLDFSESFKENLRNSDKITVEIEVEGLKEVITGR
GNSKLTLDHKTDIVIRTSDFSCSRTLMVNSNKASKDINREIVEKLKKGADLKFKIIVE
>Mature_137_residues
AFEFTIYAKGHENISANHKSTLEITKENHVTCTGDCIVGISADKSMLDFSESFKENLRNSDKITVEIEVEGLKEVITGRG
NSKLTLDHKTDIVIRTSDFSCSRTLMVNSNKASKDINREIVEKLKKGADLKFKIIVE

Specific function: Unknown

COG id: COG2090

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007171
- InterPro:   IPR023131 [H]

Pfam domain/function: PF04027 DUF371 [H]

EC number: NA

Molecular weight: Translated: 15454; Mature: 15323

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFEFTIYAKGHENISANHKSTLEITKENHVTCTGDCIVGISADKSMLDFSESFKENLRN
CEEEEEEEECCCCCCCCCCCEEEEEECCCCEEEECCEEEEECCCCHHHHHHHHHHHHCCC
SDKITVEIEVEGLKEVITGRGNSKLTLDHKTDIVIRTSDFSCSRTLMVNSNKASKDINRE
CCEEEEEEEECCHHHHHCCCCCCEEEEECCCEEEEEECCCCCEEEEEEECCCCCCHHHHH
IVEKLKKGADLKFKIIVE
HHHHHHCCCCEEEEEEEC
>Mature Secondary Structure 
AFEFTIYAKGHENISANHKSTLEITKENHVTCTGDCIVGISADKSMLDFSESFKENLRN
EEEEEEEECCCCCCCCCCCEEEEEECCCCEEEECCEEEEECCCCHHHHHHHHHHHHCCC
SDKITVEIEVEGLKEVITGRGNSKLTLDHKTDIVIRTSDFSCSRTLMVNSNKASKDINRE
CCEEEEEEEECCHHHHHCCCCCCEEEEECCCEEEEEECCCCCEEEEEEECCCCCCHHHHH
IVEKLKKGADLKFKIIVE
HHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]