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The map label for this gene is fruD [H]

Identifier: 45358946

GI number: 45358946

Start: 1363751

End: 1364341

Strand: Direct

Name: fruD [H]

Synonym: MMP1383

Alternate gene names: 45358946

Gene position: 1363751-1364341 (Clockwise)

Preceding gene: 45358945

Following gene: 45358947

Centisome position: 82.1

GC content: 38.75

Gene sequence:

>591_bases
ATGGACCTTGAGAGACACAAATTAACTTACGGTAATCATAAAAAAAATCATTTCAACGGTATTGATATGGAATACAGTTT
AACCCCTTCATACCTTTTAAAGGAAAATATGGTTCTTGCATGCGGAAATATCCTATTTGCAGACGATGGATTTAGTGTCC
ATGTAATCGAAAAATTACAGGAAATACTAACTGAAGAAGAAAAGGAAAACATTGCACTTGTAGATGCAGGAGCAGGAGCT
CCGCAACAAGTGCTCACTTTAATCGACAGTGAATCCAAGACTAAGAAAATAATAGTCGTGGATATCATCGATTACGGACT
AGAACCTGGAGAAATTAAGATACTCACTATGGATGATCTTCCAAAACCAGACCACACAAAAGTTGACAGTCATGACTGGC
CGCTCTCAACTACCATGTACAGAGTAGTTAGGGACTCCCCTCGTGAAATAGACTTTAAAGTTGTCGGTTGTCAGAAGAAG
TACGTTTCAGAACCTGATGTAGTACTTGAACTGTCAGAAGAAGTCCAAAATGCAGTAGACGTAGCCGTAGACATTGTACT
TTCCGAATTAAGGGGAAAACCAATCAACTAA

Upstream 100 bases:

>100_bases
TGCTACGCACGTCATCGTAAAAGATGAACAGACTAAAAAAGTTGTTGAAATAAGAGAATTCTAAATTCCTGAAAAGGAAA
GTCTTAGAAAGGGAACCTTA

Downstream 100 bases:

>100_bases
GGGAGGAGAATACCATGGTAAAAGTTGCCCACGTGCAATTAAGTAGCTGCTGTGGGTGTCTAGTTTCCCTTGCAGACACC
TATGAACAGCTTTTAGATGT

Product: coenzyme F420-reducing hydrogenase subunit delta

Products: reduced coenzyme F420

Alternate protein names: Putative coenzyme F420 hydrogenase-processing subunit [H]

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MDLERHKLTYGNHKKNHFNGIDMEYSLTPSYLLKENMVLACGNILFADDGFSVHVIEKLQEILTEEEKENIALVDAGAGA
PQQVLTLIDSESKTKKIIVVDIIDYGLEPGEIKILTMDDLPKPDHTKVDSHDWPLSTTMYRVVRDSPREIDFKVVGCQKK
YVSEPDVVLELSEEVQNAVDVAVDIVLSELRGKPIN

Sequences:

>Translated_196_residues
MDLERHKLTYGNHKKNHFNGIDMEYSLTPSYLLKENMVLACGNILFADDGFSVHVIEKLQEILTEEEKENIALVDAGAGA
PQQVLTLIDSESKTKKIIVVDIIDYGLEPGEIKILTMDDLPKPDHTKVDSHDWPLSTTMYRVVRDSPREIDFKVVGCQKK
YVSEPDVVLELSEEVQNAVDVAVDIVLSELRGKPIN
>Mature_196_residues
MDLERHKLTYGNHKKNHFNGIDMEYSLTPSYLLKENMVLACGNILFADDGFSVHVIEKLQEILTEEEKENIALVDAGAGA
PQQVLTLIDSESKTKKIIVVDIIDYGLEPGEIKILTMDDLPKPDHTKVDSHDWPLSTTMYRVVRDSPREIDFKVVGCQKK
YVSEPDVVLELSEEVQNAVDVAVDIVLSELRGKPIN

Specific function: Protease Involved In The C-Terminal Processing Of Hyab, The Large Subunit Of Hydrogenase 1 (Potential). [C]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A31 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004411
- InterPro:   IPR000671 [H]

Pfam domain/function: PF01750 HycI [H]

EC number: 1.12.98.1

Molecular weight: Translated: 22062; Mature: 22062

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLERHKLTYGNHKKNHFNGIDMEYSLTPSYLLKENMVLACGNILFADDGFSVHVIEKLQ
CCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCEEEEECCEEEECCCCEEHHHHHHH
EILTEEEKENIALVDAGAGAPQQVLTLIDSESKTKKIIVVDIIDYGLEPGEIKILTMDDL
HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEECCC
PKPDHTKVDSHDWPLSTTMYRVVRDSPREIDFKVVGCQKKYVSEPDVVLELSEEVQNAVD
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHEEEEHHHHHHHHH
VAVDIVLSELRGKPIN
HHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDLERHKLTYGNHKKNHFNGIDMEYSLTPSYLLKENMVLACGNILFADDGFSVHVIEKLQ
CCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHCCEEEEECCEEEECCCCEEHHHHHHH
EILTEEEKENIALVDAGAGAPQQVLTLIDSESKTKKIIVVDIIDYGLEPGEIKILTMDDL
HHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEECCC
PKPDHTKVDSHDWPLSTTMYRVVRDSPREIDFKVVGCQKKYVSEPDVVLELSEEVQNAVD
CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHCCCCHHEEEEHHHHHHHHH
VAVDIVLSELRGKPIN
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2; coenzyme F420

Specific reaction: H2 + coenzyme F420 = reduced coenzyme F420

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]