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The map label for this gene is 45358938

Identifier: 45358938

GI number: 45358938

Start: 1356373

End: 1357251

Strand: Direct

Name: 45358938

Synonym: MMP1375

Alternate gene names: NA

Gene position: 1356373-1357251 (Clockwise)

Preceding gene: 45358937

Following gene: 45358939

Centisome position: 81.65

GC content: 33.9

Gene sequence:

>879_bases
ATGGTTAACAAAGAACTGATTATAGATGATCGTGGGAAAAAATACCTTTTAAATAAAAACCTCGATAATTTCGGAAACGA
CCTTGGTGTTGTTGATTTAGTTGGAAAAGAAGAAGGATCAATTTTGATTACGAATAAAGGCGGAGAATTTTATTTCGTAA
CTCCAACAATTCACGATATTATTAAAAAAATGAAAAGAAGCGTTACAACACTTCTTCCAAAAGATATCGGATTAATTATT
GCAGAATGCGGTATTGAAAATGGAGAAACCGTTGTTGAAGCAGGTACTGGTTCTGCAGCACTTACAATCTATCTGGCAAA
CGCTGTTGGAAAAGAAGGAAAAATAATAACTTATGAAAAAAGGCCAGAATTTGCAAAAATTGCAAGAAAAAATCTTGAAA
TAGTTGGAGCCGTTAGACAAAACCAAAAAATCATCGGAATTGACGACGAGAATGAAGAAGAAATAGAAATTGTAGAAAAT
GGGCTTTACAACGTTACTCAAAAAATTGGAGACATTACTGAAAAAATAGAAGAAGAAAATATCGATGTTTTAGTTTTAGA
TATGCCTGACCCTTGGAACGTTGTTGAACATGCTAAAAAATCACTCAACAAAGCAAAGGGAAGAATTGCAATATATGTGC
CATACGTAGAACAGGCTAAAAAAGGTGTTGAAGCACTAAAAGAACATGGCTTTTTAGATATTAGGACTGTTGAATGTATT
GTAAGAGACATTGAAATTTCAGAAAAGGGAGTAAGGCCATCAACAAGAATGATCGGACACACAGGGTATATTACAACTGC
GAGAGTCTGCCCTGAAAAAGTAGTAGAATATGTTCCAAAAAAGCCAAAAGAAACTACAGAACAGCCTGAAGAAAATTAA

Upstream 100 bases:

>100_bases
AAAACAGAACTCTTCCAAAAATTGCGAGAAAGAGCTGGGCAACTTCAAAAAATCTGTTAAAGGAAATCGAAGAATCAAAA
ATATTTCAGTGGGTGAAATA

Downstream 100 bases:

>100_bases
ACTTTTTACTTAACCATTTTTTTTAAATACTACTATTTTTCATAATTATTATAACGAACACAAGTATCATCTATTTTGAG
GGATAATTTATGAAAAGATT

Product: SAM-binding motif-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MVNKELIIDDRGKKYLLNKNLDNFGNDLGVVDLVGKEEGSILITNKGGEFYFVTPTIHDIIKKMKRSVTTLLPKDIGLII
AECGIENGETVVEAGTGSAALTIYLANAVGKEGKIITYEKRPEFAKIARKNLEIVGAVRQNQKIIGIDDENEEEIEIVEN
GLYNVTQKIGDITEKIEEENIDVLVLDMPDPWNVVEHAKKSLNKAKGRIAIYVPYVEQAKKGVEALKEHGFLDIRTVECI
VRDIEISEKGVRPSTRMIGHTGYITTARVCPEKVVEYVPKKPKETTEQPEEN

Sequences:

>Translated_292_residues
MVNKELIIDDRGKKYLLNKNLDNFGNDLGVVDLVGKEEGSILITNKGGEFYFVTPTIHDIIKKMKRSVTTLLPKDIGLII
AECGIENGETVVEAGTGSAALTIYLANAVGKEGKIITYEKRPEFAKIARKNLEIVGAVRQNQKIIGIDDENEEEIEIVEN
GLYNVTQKIGDITEKIEEENIDVLVLDMPDPWNVVEHAKKSLNKAKGRIAIYVPYVEQAKKGVEALKEHGFLDIRTVECI
VRDIEISEKGVRPSTRMIGHTGYITTARVCPEKVVEYVPKKPKETTEQPEEN
>Mature_292_residues
MVNKELIIDDRGKKYLLNKNLDNFGNDLGVVDLVGKEEGSILITNKGGEFYFVTPTIHDIIKKMKRSVTTLLPKDIGLII
AECGIENGETVVEAGTGSAALTIYLANAVGKEGKIITYEKRPEFAKIARKNLEIVGAVRQNQKIIGIDDENEEEIEIVEN
GLYNVTQKIGDITEKIEEENIDVLVLDMPDPWNVVEHAKKSLNKAKGRIAIYVPYVEQAKKGVEALKEHGFLDIRTVECI
VRDIEISEKGVRPSTRMIGHTGYITTARVCPEKVVEYVPKKPKETTEQPEEN

Specific function: Unknown

COG id: COG2519

COG function: function code J; tRNA(1-methyladenosine) methyltransferase and related methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. TRM61 family [H]

Homologues:

Organism=Homo sapiens, GI222831587, Length=257, Percent_Identity=29.9610894941634, Blast_Score=95, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014816 [H]

Pfam domain/function: PF08704 GCD14 [H]

EC number: =2.1.1.36 [H]

Molecular weight: Translated: 32588; Mature: 32588

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNKELIIDDRGKKYLLNKNLDNFGNDLGVVDLVGKEEGSILITNKGGEFYFVTPTIHDI
CCCCEEEEECCCCEEEECCCCHHHCCCCCEEEEECCCCCCEEEEECCCCEEEECCCHHHH
IKKMKRSVTTLLPKDIGLIIAECGIENGETVVEAGTGSAALTIYLANAVGKEGKIITYEK
HHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEECCCCEEEEEEEEECCCCCCCEEEEEC
RPEFAKIARKNLEIVGAVRQNQKIIGIDDENEEEIEIVENGLYNVTQKIGDITEKIEEEN
CCCHHHHHHCCCCEEEEECCCCEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCC
IDVLVLDMPDPWNVVEHAKKSLNKAKGRIAIYVPYVEQAKKGVEALKEHGFLDIRTVECI
CCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCEEEEHHHHH
VRDIEISEKGVRPSTRMIGHTGYITTARVCPEKVVEYVPKKPKETTEQPEEN
HHHHHHCCCCCCCCHHEEECCCCEEEHHCCHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVNKELIIDDRGKKYLLNKNLDNFGNDLGVVDLVGKEEGSILITNKGGEFYFVTPTIHDI
CCCCEEEEECCCCEEEECCCCHHHCCCCCEEEEECCCCCCEEEEECCCCEEEECCCHHHH
IKKMKRSVTTLLPKDIGLIIAECGIENGETVVEAGTGSAALTIYLANAVGKEGKIITYEK
HHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEECCCCEEEEEEEEECCCCCCCEEEEEC
RPEFAKIARKNLEIVGAVRQNQKIIGIDDENEEEIEIVENGLYNVTQKIGDITEKIEEEN
CCCHHHHHHCCCCEEEEECCCCEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCC
IDVLVLDMPDPWNVVEHAKKSLNKAKGRIAIYVPYVEQAKKGVEALKEHGFLDIRTVECI
CCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHCCCEEEEHHHHH
VRDIEISEKGVRPSTRMIGHTGYITTARVCPEKVVEYVPKKPKETTEQPEEN
HHHHHHCCCCCCCCHHEEECCCCEEEHHCCHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]