Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410213
Identifier: 41410213
GI number: 41410213
Start: 4586070
End: 4586750
Strand: Reverse
Name: 41410213
Synonym: MAP4115c
Alternate gene names: NA
Gene position: 4586750-4586070 (Counterclockwise)
Preceding gene: 41410214
Following gene: 41410212
Centisome position: 94.97
GC content: 73.42
Gene sequence:
>681_bases TTGATCAGCAGGGAGCGGGAGCGCAAGCCCGACGACGCGGCCGCCGCGATGGCGGCGTGGGAAAGCTTCCACGCCAAGGC AGGGCCGGCGATCAAGGCCGGTGACGCGCTGGCGCCCGCCGCGGCCGCGGCTGTCATCACCGGCGGCCCCGACGCGCCGG TGGTGACCGACGGCCCGTTCGCCGAGACCGCGGAGGTGGCCTGCGGCTACTACATTTTCGAGGCCGAAAACCTCGACGAG GCGCTGGCGCTGGCGCGCGACGTGCCGGTCGCCGCGTTCGGGGCGGTGGAGCTGTGGCCGGTGGTGCACGCGGTCGAGCC GTCCCGCAGGATCACCGGCAACGACTGGCTGGCGCTGCTGCTGGAACCGGCCGAATCCGCCCACACGCCCGGCACGCCGG AGTGGGAGGCGGTGGCCGCCAAGCACGCGGAGCTGCACGCGGCCGCCGGCGACCACATCATCGGCGGCGCCGCGCTGCAC GACAAGTCCACCGCCACCACGGTGCGGGTGCGCGACGGCGAGGTGCTGATCACCGACGGGCCGTATGTGGAGAGCGCGGA GATCGCCACCGGGATCTACCTGCTGGGCGCCGCCGATCGCGACGAGGCCGTCAAGATCGCGTCCATGATTCCCGCGTCGA CGGTGCAGCTGCGCCAGCTGGCGGGAGTCTCCGGCCTGTAG
Upstream 100 bases:
>100_bases GCTGTCGGATTAGGGCTGCGCCGTTCGTCGAGTAGGTAGAGAGTGGAACACACGGTTCCGCTCACCACCTGGAGGTGACG ACATGCAGTACTTCGCGCTG
Downstream 100 bases:
>100_bases GCGCATGGCCGACCTGGACGGCGTCTTCCGCCGGGAGTGGGGACCCGCCGTCGCCGCGCTGGCGCGGTGGTCGGGTGACC TCACCGTCGCCGAGGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: DGPFAETKE Family Protein
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MISRERERKPDDAAAAMAAWESFHAKAGPAIKAGDALAPAAAAAVITGGPDAPVVTDGPFAETAEVACGYYIFEAENLDE ALALARDVPVAAFGAVELWPVVHAVEPSRRITGNDWLALLLEPAESAHTPGTPEWEAVAAKHAELHAAAGDHIIGGAALH DKSTATTVRVRDGEVLITDGPYVESAEIATGIYLLGAADRDEAVKIASMIPASTVQLRQLAGVSGL
Sequences:
>Translated_226_residues MISRERERKPDDAAAAMAAWESFHAKAGPAIKAGDALAPAAAAAVITGGPDAPVVTDGPFAETAEVACGYYIFEAENLDE ALALARDVPVAAFGAVELWPVVHAVEPSRRITGNDWLALLLEPAESAHTPGTPEWEAVAAKHAELHAAAGDHIIGGAALH DKSTATTVRVRDGEVLITDGPYVESAEIATGIYLLGAADRDEAVKIASMIPASTVQLRQLAGVSGL >Mature_226_residues MISRERERKPDDAAAAMAAWESFHAKAGPAIKAGDALAPAAAAAVITGGPDAPVVTDGPFAETAEVACGYYIFEAENLDE ALALARDVPVAAFGAVELWPVVHAVEPSRRITGNDWLALLLEPAESAHTPGTPEWEAVAAKHAELHAAAGDHIIGGAALH DKSTATTVRVRDGEVLITDGPYVESAEIATGIYLLGAADRDEAVKIASMIPASTVQLRQLAGVSGL
Specific function: Unknown
COG id: COG3795
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23344; Mature: 23344
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRERERKPDDAAAAMAAWESFHAKAGPAIKAGDALAPAAAAAVITGGPDAPVVTDGPF CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHEEEEECCCCCCEEECCCC AETAEVACGYYIFEAENLDEALALARDVPVAAFGAVELWPVVHAVEPSRRITGNDWLALL CHHHHHHEEEEEEECCCHHHHHHHHHCCCEEHCCHHHHHHHHEECCCCCCCCCCCEEEEE LEPAESAHTPGTPEWEAVAAKHAELHAAAGDHIIGGAALHDKSTATTVRVRDGEVLITDG ECCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCEEECCCCCEEEEEEECCEEEEECC PYVESAEIATGIYLLGAADRDEAVKIASMIPASTVQLRQLAGVSGL CCCCCHHHHCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHCCCCCC >Mature Secondary Structure MISRERERKPDDAAAAMAAWESFHAKAGPAIKAGDALAPAAAAAVITGGPDAPVVTDGPF CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHEEEEECCCCCCEEECCCC AETAEVACGYYIFEAENLDEALALARDVPVAAFGAVELWPVVHAVEPSRRITGNDWLALL CHHHHHHEEEEEEECCCHHHHHHHHHCCCEEHCCHHHHHHHHEECCCCCCCCCCCEEEEE LEPAESAHTPGTPEWEAVAAKHAELHAAAGDHIIGGAALHDKSTATTVRVRDGEVLITDG ECCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEECCEEECCCCCEEEEEEECCEEEEECC PYVESAEIATGIYLLGAADRDEAVKIASMIPASTVQLRQLAGVSGL CCCCCHHHHCEEEEEECCCCCHHHHHHHHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA