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The map label for this gene is 41410212

Identifier: 41410212

GI number: 41410212

Start: 4584803

End: 4586065

Strand: Reverse

Name: 41410212

Synonym: MAP4114c

Alternate gene names: NA

Gene position: 4586065-4584803 (Counterclockwise)

Preceding gene: 41410213

Following gene: 41410202

Centisome position: 94.95

GC content: 71.58

Gene sequence:

>1263_bases
ATGGCCGACCTGGACGGCGTCTTCCGCCGGGAGTGGGGACCCGCCGTCGCCGCGCTGGCGCGGTGGTCGGGTGACCTCAC
CGTCGCCGAGGACGCCGTCCAGGAGGCCTGCGCCGAGGCGCTGCGCGTCTGGCCTCGCGACGGGATGCCCGCCAATCCGG
GCGGCTGGCTGGTCACCGTCGCACGCAACCGCGCCCGCGATCGGCTGCGCCGCGAATCCGCGCGTCCCGGAAAGGAATTG
GCCGCCGTGCTGGACGACATTCGGGCGCGCACCGATGCCGCCGACCCGCATCCGGTGCGCGACGACGAGCTGCGGATGAT
GTTCACCTGCGCGCACCCGGCCCTGGACCGGCCGTCGCAGCTGGCGCTGACGCTGCGCTTGGTGTCCGGGCTGACCGTCG
CCGAGATCGCCCGGGCGCTGCTGCAGTCCGAGGCCGCCATCGGTCAGCGAATCACCCGCGCCAAGAACAAGGTTCGCCAC
GCCAACATCCCGCTCAGGGTGCCGCCCGCCGAGCTGCTGGGCGAGCGCACTCCGCACGTGCTGGGCTGTGTGTACTCGGT
GTTCACCGAGGGCTACTGGTCCACCGCGGGGCCGTCGGCGATCCGGGACGACCTGTGCGACGAAGGCATTCGGCTGGGCG
CCGAGTTGTGCGCGCTGCTGCCCGACGAGCGCGAGGCACACGCGCTGTCCGCGCTGATGCTGCTGCATGATTCGCGGCGC
GCCACAAGGGTCGACGCCCGCGGTGTGCCGGTGCCGCTCGAGGAGCAGGACCGTACGCGCTGGGACCGCCGGCGCATCAC
GGCCGGACTGGACCGGTTGCGTTATGCCGAGGGGTCGAGCGGCGCCTACCTGCCGCAGGCGGTCATCGCCGCGCTGCACG
CCACCGCGCCGTCCTGGGAGCAGACGGATTGGGTCACCATCTGCGCGGCCTATGACCGGCTGTGGCAATTGACCCGTTCA
CCGGTGGTGGCCGCGAATCGGGCGCTGGCGATCGGGCTGCGCGACGGTCCCGACGCCGGCTTAGCCGCTTTGGAGGAGGT
GGACGAACCTAAGCTGGAACGCTCGAATCTCATCGCGACGCTCCGCGCCGATCTCCTGCGGCGCGCCGGGCGGCCCGCCG
AGGCGCTGCCCTGGTACCGAATCGCGTTGCAGTCCAACGGTTCCGAGCCGGGCCGCAAATTCCTGAGACGGCGCATCGCC
GAGTGCACTTCAGCTGCCGAAAGTGCAACTGGCGACGCATTTCCCGAGAACGGCCGTCGCTAG

Upstream 100 bases:

>100_bases
GGCGCCGCCGATCGCGACGAGGCCGTCAAGATCGCGTCCATGATTCCCGCGTCGACGGTGCAGCTGCGCCAGCTGGCGGG
AGTCTCCGGCCTGTAGGCGC

Downstream 100 bases:

>100_bases
TTGCACTCTCGCGGCGGGACCTAGGCCTCGGCGAAGTTGCGGGTGATCGACGGGTCCACCGGAATGCCCGGGCCCGTCGT
CGTCGACACGGTGATCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MADLDGVFRREWGPAVAALARWSGDLTVAEDAVQEACAEALRVWPRDGMPANPGGWLVTVARNRARDRLRRESARPGKEL
AAVLDDIRARTDAADPHPVRDDELRMMFTCAHPALDRPSQLALTLRLVSGLTVAEIARALLQSEAAIGQRITRAKNKVRH
ANIPLRVPPAELLGERTPHVLGCVYSVFTEGYWSTAGPSAIRDDLCDEGIRLGAELCALLPDEREAHALSALMLLHDSRR
ATRVDARGVPVPLEEQDRTRWDRRRITAGLDRLRYAEGSSGAYLPQAVIAALHATAPSWEQTDWVTICAAYDRLWQLTRS
PVVAANRALAIGLRDGPDAGLAALEEVDEPKLERSNLIATLRADLLRRAGRPAEALPWYRIALQSNGSEPGRKFLRRRIA
ECTSAAESATGDAFPENGRR

Sequences:

>Translated_420_residues
MADLDGVFRREWGPAVAALARWSGDLTVAEDAVQEACAEALRVWPRDGMPANPGGWLVTVARNRARDRLRRESARPGKEL
AAVLDDIRARTDAADPHPVRDDELRMMFTCAHPALDRPSQLALTLRLVSGLTVAEIARALLQSEAAIGQRITRAKNKVRH
ANIPLRVPPAELLGERTPHVLGCVYSVFTEGYWSTAGPSAIRDDLCDEGIRLGAELCALLPDEREAHALSALMLLHDSRR
ATRVDARGVPVPLEEQDRTRWDRRRITAGLDRLRYAEGSSGAYLPQAVIAALHATAPSWEQTDWVTICAAYDRLWQLTRS
PVVAANRALAIGLRDGPDAGLAALEEVDEPKLERSNLIATLRADLLRRAGRPAEALPWYRIALQSNGSEPGRKFLRRRIA
ECTSAAESATGDAFPENGRR
>Mature_419_residues
ADLDGVFRREWGPAVAALARWSGDLTVAEDAVQEACAEALRVWPRDGMPANPGGWLVTVARNRARDRLRRESARPGKELA
AVLDDIRARTDAADPHPVRDDELRMMFTCAHPALDRPSQLALTLRLVSGLTVAEIARALLQSEAAIGQRITRAKNKVRHA
NIPLRVPPAELLGERTPHVLGCVYSVFTEGYWSTAGPSAIRDDLCDEGIRLGAELCALLPDEREAHALSALMLLHDSRRA
TRVDARGVPVPLEEQDRTRWDRRRITAGLDRLRYAEGSSGAYLPQAVIAALHATAPSWEQTDWVTICAAYDRLWQLTRSP
VVAANRALAIGLRDGPDAGLAALEEVDEPKLERSNLIATLRADLLRRAGRPAEALPWYRIALQSNGSEPGRKFLRRRIAE
CTSAAESATGDAFPENGRR

Specific function: Unknown

COG id: COG4941

COG function: function code K; Predicted RNA polymerase sigma factor containing a TPR repeat domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008940
- InterPro:   IPR014284
- InterPro:   IPR007627
- InterPro:   IPR013249
- InterPro:   IPR013325
- InterPro:   IPR013324 [H]

Pfam domain/function: PF04542 Sigma70_r2; PF08281 Sigma70_r4_2 [H]

EC number: NA

Molecular weight: Translated: 46169; Mature: 46038

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLDGVFRREWGPAVAALARWSGDLTVAEDAVQEACAEALRVWPRDGMPANPGGWLVTV
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
ARNRARDRLRRESARPGKELAAVLDDIRARTDAADPHPVRDDELRMMFTCAHPALDRPSQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHH
LALTLRLVSGLTVAEIARALLQSEAAIGQRITRAKNKVRHANIPLRVPPAELLGERTPHV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHH
LGCVYSVFTEGYWSTAGPSAIRDDLCDEGIRLGAELCALLPDEREAHALSALMLLHDSRR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
ATRVDARGVPVPLEEQDRTRWDRRRITAGLDRLRYAEGSSGAYLPQAVIAALHATAPSWE
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
QTDWVTICAAYDRLWQLTRSPVVAANRALAIGLRDGPDAGLAALEEVDEPKLERSNLIAT
CCHHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHH
LRADLLRRAGRPAEALPWYRIALQSNGSEPGRKFLRRRIAECTSAAESATGDAFPENGRR
HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ADLDGVFRREWGPAVAALARWSGDLTVAEDAVQEACAEALRVWPRDGMPANPGGWLVTV
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEE
ARNRARDRLRRESARPGKELAAVLDDIRARTDAADPHPVRDDELRMMFTCAHPALDRPSQ
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHH
LALTLRLVSGLTVAEIARALLQSEAAIGQRITRAKNKVRHANIPLRVPPAELLGERTPHV
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHH
LGCVYSVFTEGYWSTAGPSAIRDDLCDEGIRLGAELCALLPDEREAHALSALMLLHDSRR
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCH
ATRVDARGVPVPLEEQDRTRWDRRRITAGLDRLRYAEGSSGAYLPQAVIAALHATAPSWE
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
QTDWVTICAAYDRLWQLTRSPVVAANRALAIGLRDGPDAGLAALEEVDEPKLERSNLIAT
CCHHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHH
LRADLLRRAGRPAEALPWYRIALQSNGSEPGRKFLRRRIAECTSAAESATGDAFPENGRR
HHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430; 7751302 [H]