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The map label for this gene is secE

Identifier: 41410208

GI number: 41410208

Start: 4582190

End: 4582633

Strand: Direct

Name: secE

Synonym: MAP4110

Alternate gene names: 41410208

Gene position: 4582190-4582633 (Clockwise)

Preceding gene: 41410207

Following gene: 41410209

Centisome position: 94.87

GC content: 68.02

Gene sequence:

>444_bases
GTGAGCGACGAAGGCGACGTTGCCAACGACGCCGCAAGCGACGGCGCTGACACGACGGACGACCGCGCCGGCGGTGGCCG
GACCGCGGTGGTGACGCGGCCGCAGCGCCCTACCGGCAAGCGGTCACGGCAGCGGGCGGCGGGGGACGCCGACGCGGAGC
CGTCGGACGAGGCCGAGGTCTCCGCGCCGGAGAAAGCCGAGAAAGCCAAGCGCAAGAAGGCCGCGAAGCCGAAGAAATCC
GCGGACACCCGGGCGAACCCGTTTGTGTTCGTCTACAACTACCTCAAGCAGGTCGTTGCAGAGATGCGGAAGGTCATCTG
GCCCAACCGCAAGCAGATGCTCACCTACACCTCCGTCGTGCTGGCCTTCCTGGCCTTCATGGTGGCGCTGGTCGGCCTGG
CGGATTTCGGCCTGACCAAGCTGGTGCTGCTGGTGTTCGGCTGA

Upstream 100 bases:

>100_bases
CGCCCCTGCTGAACAGGGATCCGTGTCATGGTGGACACTGGAAGACATGCCGCCACTGATGGGACGGCTCTTGGGGTACT
AGCAAACAAAGGAGCATGCG

Downstream 100 bases:

>100_bases
GCGAGTGACGCCGCTTTGAAAGTGACAGAGAGGACTCAACCCGTGACTACCTTCGACGGTGACCCGTCCGCGGGTGACGC
GGTCGACCTGAGGGAGACCG

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSDEGDVANDAASDGADTTDDRAGGGRTAVVTRPQRPTGKRSRQRAAGDADAEPSDEAEVSAPEKAEKAKRKKAAKPKKS
ADTRANPFVFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVGLADFGLTKLVLLVFG

Sequences:

>Translated_147_residues
MSDEGDVANDAASDGADTTDDRAGGGRTAVVTRPQRPTGKRSRQRAAGDADAEPSDEAEVSAPEKAEKAKRKKAAKPKKS
ADTRANPFVFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVGLADFGLTKLVLLVFG
>Mature_146_residues
SDEGDVANDAASDGADTTDDRAGGGRTAVVTRPQRPTGKRSRQRAAGDADAEPSDEAEVSAPEKAEKAKRKKAAKPKKSA
DTRANPFVFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVVLAFLAFMVALVGLADFGLTKLVLLVFG

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 15876; Mature: 15745

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEGDVANDAASDGADTTDDRAGGGRTAVVTRPQRPTGKRSRQRAAGDADAEPSDEAEV
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCC
SAPEKAEKAKRKKAAKPKKSADTRANPFVFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVV
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAFLAFMVALVGLADFGLTKLVLLVFG
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDEGDVANDAASDGADTTDDRAGGGRTAVVTRPQRPTGKRSRQRAAGDADAEPSDEAEV
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCC
SAPEKAEKAKRKKAAKPKKSADTRANPFVFVYNYLKQVVAEMRKVIWPNRKQMLTYTSVV
CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LAFLAFMVALVGLADFGLTKLVLLVFG
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]