Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is rpmG
Identifier: 41410204
GI number: 41410204
Start: 4580263
End: 4580430
Strand: Direct
Name: rpmG
Synonym: MAP4106
Alternate gene names: 41410204
Gene position: 4580263-4580430 (Clockwise)
Preceding gene: 41410203
Following gene: 41410205
Centisome position: 94.83
GC content: 58.93
Gene sequence:
>168_bases ATGGCTTCCAGTACCGACGTACGGCCGAAAATCACCTTGGCGTGCGAGGTGTGCAAGCACCGCAACTACATCACCAAGAA AAACCGCCGGAACGACCCGGACCGACTGGAGCTGAAGAAGTACTGCCCCAACTGCGGTAAGCACCAGGCGCATCGGGAGA CACGCTAG
Upstream 100 bases:
>100_bases TTAGAGCGAACGACTCATAATCGTTAGGTCGCCGGTTCGAGTCCGGCCATCGCTACAACCCAACAGCACGGATTTTTTCA CGAATCGAGGCAGAACCGTC
Downstream 100 bases:
>100_bases CGGCCGGCCGCGCGCGTTCACTCCGATTGACTAGGTAGTTTAAGAACCGTGCCGTTAACCACAAACCTCGTCGGGATGCA CTACCGCTACCCCGACCATT
Product: 50S ribosomal protein L33
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR
Sequences:
>Translated_55_residues MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR >Mature_54_residues ASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR
Specific function: Unknown
COG id: COG0267
COG function: function code J; Ribosomal protein L33
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L33P family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL331_MYCA1 (A0QL73)
Other databases:
- EMBL: CP000479 - RefSeq: YP_883661.1 - ProteinModelPortal: A0QL73 - SMR: A0QL73 - STRING: A0QL73 - EnsemblBacteria: EBMYCT00000012564 - GeneID: 4527481 - GenomeReviews: CP000479_GR - KEGG: mav:MAV_4528 - TIGR: MAV_4528 - eggNOG: COG0267 - GeneTree: EBGT00050000017611 - HOGENOM: HBG751058 - BioCyc: MAVI243243:MAV_4528-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00294 - InterPro: IPR001705 - InterPro: IPR018264 - InterPro: IPR011332 - TIGRFAMs: TIGR01023
Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd
EC number: NA
Molecular weight: Translated: 6512; Mature: 6380
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: PS00582 RIBOSOMAL_L33
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA