Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is rpmG

Identifier: 41410204

GI number: 41410204

Start: 4580263

End: 4580430

Strand: Direct

Name: rpmG

Synonym: MAP4106

Alternate gene names: 41410204

Gene position: 4580263-4580430 (Clockwise)

Preceding gene: 41410203

Following gene: 41410205

Centisome position: 94.83

GC content: 58.93

Gene sequence:

>168_bases
ATGGCTTCCAGTACCGACGTACGGCCGAAAATCACCTTGGCGTGCGAGGTGTGCAAGCACCGCAACTACATCACCAAGAA
AAACCGCCGGAACGACCCGGACCGACTGGAGCTGAAGAAGTACTGCCCCAACTGCGGTAAGCACCAGGCGCATCGGGAGA
CACGCTAG

Upstream 100 bases:

>100_bases
TTAGAGCGAACGACTCATAATCGTTAGGTCGCCGGTTCGAGTCCGGCCATCGCTACAACCCAACAGCACGGATTTTTTCA
CGAATCGAGGCAGAACCGTC

Downstream 100 bases:

>100_bases
CGGCCGGCCGCGCGCGTTCACTCCGATTGACTAGGTAGTTTAAGAACCGTGCCGTTAACCACAAACCTCGTCGGGATGCA
CTACCGCTACCCCGACCATT

Product: 50S ribosomal protein L33

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 54

Protein sequence:

>55_residues
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR

Sequences:

>Translated_55_residues
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR
>Mature_54_residues
ASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR

Specific function: Unknown

COG id: COG0267

COG function: function code J; Ribosomal protein L33

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L33P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL331_MYCA1 (A0QL73)

Other databases:

- EMBL:   CP000479
- RefSeq:   YP_883661.1
- ProteinModelPortal:   A0QL73
- SMR:   A0QL73
- STRING:   A0QL73
- EnsemblBacteria:   EBMYCT00000012564
- GeneID:   4527481
- GenomeReviews:   CP000479_GR
- KEGG:   mav:MAV_4528
- TIGR:   MAV_4528
- eggNOG:   COG0267
- GeneTree:   EBGT00050000017611
- HOGENOM:   HBG751058
- BioCyc:   MAVI243243:MAV_4528-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00294
- InterPro:   IPR001705
- InterPro:   IPR018264
- InterPro:   IPR011332
- TIGRFAMs:   TIGR01023

Pfam domain/function: PF00471 Ribosomal_L33; SSF57829 Ribosomal_zn-bd

EC number: NA

Molecular weight: Translated: 6512; Mature: 6380

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS00582 RIBOSOMAL_L33

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASSTDVRPKITLACEVCKHRNYITKKNRRNDPDRLELKKYCPNCGKHQAHRETR
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA