Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410203
Identifier: 41410203
GI number: 41410203
Start: 4579704
End: 4579934
Strand: Direct
Name: 41410203
Synonym: MAP4105
Alternate gene names: NA
Gene position: 4579704-4579934 (Clockwise)
Preceding gene: 41410197
Following gene: 41410204
Centisome position: 94.82
GC content: 62.77
Gene sequence:
>231_bases GTGGTCAGTGGGTATTGTTGCCGCATGAGGAAGAAGGTTGAAATCGAGGTCGACCTCGAATTGGTCGATGAGGCGATCCG CCGCTTCCATCTCGCCGACGCCCGCGAGGCCGTCAATCTCGCGTTGCGGACCCTGCTGCACGAGGGCGATTCCGTCGCAT CCGAAGACGAGTACGACGAGTTCAGCGACCTCAGCGCCTGGCAGCCTCGGCGGAACGCCGAAAGCGGCTGA
Upstream 100 bases:
>100_bases CTGACCAGACTATGACGCGGCCGCGGGTGGCCCGCCACCCCTTGCGGATTCGGCCGGCCGGACTTTGCCGCACACGGCCT GCCAGCAACGGCTTCGGCGG
Downstream 100 bases:
>100_bases TCGGCATCCGGCGTGGTTTGGTGCCGCTGCGAACCAGGCTGTACCCTCTTCTAGGCCCGCGCGACTGGTCGCTTCGGGTG AACGGCCCCCTTAGCTCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MVSGYCCRMRKKVEIEVDLELVDEAIRRFHLADAREAVNLALRTLLHEGDSVASEDEYDEFSDLSAWQPRRNAESG
Sequences:
>Translated_76_residues MVSGYCCRMRKKVEIEVDLELVDEAIRRFHLADAREAVNLALRTLLHEGDSVASEDEYDEFSDLSAWQPRRNAESG >Mature_76_residues MVSGYCCRMRKKVEIEVDLELVDEAIRRFHLADAREAVNLALRTLLHEGDSVASEDEYDEFSDLSAWQPRRNAESG
Specific function: Unknown
COG id: COG5450
COG function: function code K; Transcription regulator of the Arc/MetJ class
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019239 [H]
Pfam domain/function: PF09957 DUF2191 [H]
EC number: NA
Molecular weight: Translated: 8714; Mature: 8714
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSGYCCRMRKKVEIEVDLELVDEAIRRFHLADAREAVNLALRTLLHEGDSVASEDEYDE CCCCHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH FSDLSAWQPRRNAESG HHCCCCCCCCCCCCCC >Mature Secondary Structure MVSGYCCRMRKKVEIEVDLELVDEAIRRFHLADAREAVNLALRTLLHEGDSVASEDEYDE CCCCHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH FSDLSAWQPRRNAESG HHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]