Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410198
Identifier: 41410198
GI number: 41410198
Start: 4574378
End: 4574857
Strand: Reverse
Name: 41410198
Synonym: MAP4100c
Alternate gene names: NA
Gene position: 4574857-4574378 (Counterclockwise)
Preceding gene: 41410199
Following gene: 41410193
Centisome position: 94.72
GC content: 70.62
Gene sequence:
>480_bases ATGAAACTGAGGCTGGCGATCCGCGAACTGCACCGCTCCGAACGCAAGCTGGCCCACCAACTGACCGTGCTGGCCGCCCG GCACCACAGCGACCAGGACATTTTCCACCTGGCCCGCGACCTGGCCGGCTGGTCGCACCGGCACCTCGGCGAGCTCGCAC GGCACGGCCGCCACTACGGTCTGCGGCTGTCCGCCGATCCGCGCACCGCTGCGCGCACCGGTGTCGTGCAGCAGCGGATC AGCGGTCTGCTGCGGCACCGGCCGGAACCCGGGCTGGTGCTGCTGGCCGACCTGCGCCGGATCCACCGGCTGGCCGCCGG CGTGTCGCTGGACTGGGAGCTGCTGGCCCAAGGTGCGCAGGCGGCCAAGGATGCCGAGCTGCTGGGCCTGGCGTCGCGCT GTCACCCCGAGACGCTGCGCCAGATGCGTTGGGCCAACGCAATGCTCAAGGAGCTTTCGCCGCAGGTGTTGATGAACTGA
Upstream 100 bases:
>100_bases CCAAGCAGCCGAGCTTCAAAACGGCCGCCGCCCGGCTCGACAAGGCCCCGAGCCACAGGGCGGCGCCGGTGAGCGAGGCC GTCGCGGCCGGGAGCCCGTC
Downstream 100 bases:
>100_bases GAGGCGAACGCGGTGGCCGCTGCTCGCCGCCACCGCGTTGCTCGCCTCCTCGCCGCCAGTGTGGCACGTGCGCGCCGGGC CGTCACTTCACCCGCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKLRLAIRELHRSERKLAHQLTVLAARHHSDQDIFHLARDLAGWSHRHLGELARHGRHYGLRLSADPRTAARTGVVQQRI SGLLRHRPEPGLVLLADLRRIHRLAAGVSLDWELLAQGAQAAKDAELLGLASRCHPETLRQMRWANAMLKELSPQVLMN
Sequences:
>Translated_159_residues MKLRLAIRELHRSERKLAHQLTVLAARHHSDQDIFHLARDLAGWSHRHLGELARHGRHYGLRLSADPRTAARTGVVQQRI SGLLRHRPEPGLVLLADLRRIHRLAAGVSLDWELLAQGAQAAKDAELLGLASRCHPETLRQMRWANAMLKELSPQVLMN >Mature_159_residues MKLRLAIRELHRSERKLAHQLTVLAARHHSDQDIFHLARDLAGWSHRHLGELARHGRHYGLRLSADPRTAARTGVVQQRI SGLLRHRPEPGLVLLADLRRIHRLAAGVSLDWELLAQGAQAAKDAELLGLASRCHPETLRQMRWANAMLKELSPQVLMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18024; Mature: 18024
Theoretical pI: Translated: 11.79; Mature: 11.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRLAIRELHRSERKLAHQLTVLAARHHSDQDIFHLARDLAGWSHRHLGELARHGRHYG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCC LRLSADPRTAARTGVVQQRISGLLRHRPEPGLVLLADLRRIHRLAAGVSLDWELLAQGAQ EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHH AAKDAELLGLASRCHPETLRQMRWANAMLKELSPQVLMN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MKLRLAIRELHRSERKLAHQLTVLAARHHSDQDIFHLARDLAGWSHRHLGELARHGRHYG CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCC LRLSADPRTAARTGVVQQRISGLLRHRPEPGLVLLADLRRIHRLAAGVSLDWELLAQGAQ EEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHHHHHH AAKDAELLGLASRCHPETLRQMRWANAMLKELSPQVLMN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA