Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410184
Identifier: 41410184
GI number: 41410184
Start: 4555581
End: 4557035
Strand: Direct
Name: 41410184
Synonym: MAP4086
Alternate gene names: NA
Gene position: 4555581-4557035 (Clockwise)
Preceding gene: 41410183
Following gene: 41410185
Centisome position: 94.32
GC content: 70.1
Gene sequence:
>1455_bases GTGCACGCCGCAATGAGGACGCTGACCGAGTTCAACCGCACCCGGGTCGGCCTGATGGGCGCGCTGGTGACGGTGCTGGT TGTCGGTGTGGGACAAAGCTTCACCAGCGTGCCGATGCTGTTCGCCACGCCGACCTACTACGCGCAATTCACCGACGCCG GCGGTATCAACGTCGGCGACAAGGTGCAGATCGCCGGGGTGAACGTGGGATTGGTGAGTTCGCTGGTGATCCGCGGCGAC CGGGTGCTGGTCGGCTTCTCGATGCCCGGCAAGACGATCGGCGCGCAGAGCCGGTCGGCGATCCGCACCGACACCTTCCT GGGACGCAAGAACATGGCCATCCAGCCGCGCGGCGCGGATCCGTTGCCGCCCCACGGGATAATCCCGTCCGGGCAGACCA CCACGCCCTACCAGATCTACGACGCGTTCGTCGACGTCACCAAGGCGGCCACGGACTGGAACATCGACGTCGTCAAGCGG TCGTTGAACGTGTTGTCGGAGACCTTCAATCAGACCGCGCCGCACCTGAAGGCCGCCCTCGACGGGGTGGCCAGATTCTC CGGCACCATCGGCAACCGGGACGAACAGATCAAGCAACTGCTGACCAACGCCGACAAGATCACGCGCGTGCTCGGCGACC GCAGCGGGCAGGTCGACGCCCTGCTGGTCAACGCCAACACCCTGCTCGCCGCGTTCCGGCAGCGCAGCCAGGCGCTGAGC GCCCTGCTGAGCAACGTGTCGGCGGTGTCCACCCAGGTGTCGGGATTCATCAAGGAAAACCCCGATGCGCACCAGGTGCT GCGGCAGTTGGGCACCGTCAGCGACGAGCTGGTCAAGCGCAAGAAGGAACTCTCCGATGTTCTCGTGCTGGTCAGCAGGT ACACCGCATCCCTGACCGAGGCCGTCGCCTCCGGCCCGTTCTTCAAGGCGATCGTGGCGAATCTGCTTCCCTACCAAGTA CTTCAGCCGTGGGTCGACGCGGCGTTCAAGAAGCGGGGCATCGACCCGGAGAACTTCTGGCGCAGCGCCGGGCTGCCGGC GTTCCGCTGGCCCGACCCCAACGGCACCCGGTTGCCCAACGGCGCGCCACCGCCGGCCCCGCCGGTGGCCGAGGGCACCC CGGACCATCCCGGGCCGGCCGTCCCACCCGGGTCGCCGTGTTCGTACACGCCGGCCGCCGACAGCCCGCCGCGGCCGGGA AATCCGTTGCCGTGCGCGCTTTCCGGTCAGGGGCCGTTCGGCCCGGTCCCCGACGGCTTCCCGGCCCCGCTGGATGTCGA GACGTCGCCGCCGGCGCCGGACGGGCCGCCGCCGTCGCCCGGGGTGCCGAGCGCGGGACGCCCGGGTGAGGCCCCGCCCG ACGTCCCCGGCACCCCGGTGCCGCTGCCGGTGCACGCCCCGCCGGGGGCGCGCACCGAGAACCCGCCCGACGCGACAGGG GGGAGCACCCGATGA
Upstream 100 bases:
>100_bases TCTACAACTTCTACCTGTGTGATATCTCGATCAAAGTCAACGGATTACAGCCCGGCGGTCCGGTACGCACCATCAAGCTC TTCGGACAGCCGACCGGGAG
Downstream 100 bases:
>100_bases GCACCATCTTCGACATCCGAAACCTGCGGCTGCCCAAGGTGTCCGCCCGGGTGCTGGTGATCGCGGCGCTGGCGGCGGTC TTCGTCTTCATCGCGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family C; MCE Family Protein; Mce Family C; MCE-Family Protein; Mce-Family C; Mce-Related Protein; Mce Family Protein Mce5C
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MHAAMRTLTEFNRTRVGLMGALVTVLVVGVGQSFTSVPMLFATPTYYAQFTDAGGINVGDKVQIAGVNVGLVSSLVIRGD RVLVGFSMPGKTIGAQSRSAIRTDTFLGRKNMAIQPRGADPLPPHGIIPSGQTTTPYQIYDAFVDVTKAATDWNIDVVKR SLNVLSETFNQTAPHLKAALDGVARFSGTIGNRDEQIKQLLTNADKITRVLGDRSGQVDALLVNANTLLAAFRQRSQALS ALLSNVSAVSTQVSGFIKENPDAHQVLRQLGTVSDELVKRKKELSDVLVLVSRYTASLTEAVASGPFFKAIVANLLPYQV LQPWVDAAFKKRGIDPENFWRSAGLPAFRWPDPNGTRLPNGAPPPAPPVAEGTPDHPGPAVPPGSPCSYTPAADSPPRPG NPLPCALSGQGPFGPVPDGFPAPLDVETSPPAPDGPPPSPGVPSAGRPGEAPPDVPGTPVPLPVHAPPGARTENPPDATG GSTR
Sequences:
>Translated_484_residues MHAAMRTLTEFNRTRVGLMGALVTVLVVGVGQSFTSVPMLFATPTYYAQFTDAGGINVGDKVQIAGVNVGLVSSLVIRGD RVLVGFSMPGKTIGAQSRSAIRTDTFLGRKNMAIQPRGADPLPPHGIIPSGQTTTPYQIYDAFVDVTKAATDWNIDVVKR SLNVLSETFNQTAPHLKAALDGVARFSGTIGNRDEQIKQLLTNADKITRVLGDRSGQVDALLVNANTLLAAFRQRSQALS ALLSNVSAVSTQVSGFIKENPDAHQVLRQLGTVSDELVKRKKELSDVLVLVSRYTASLTEAVASGPFFKAIVANLLPYQV LQPWVDAAFKKRGIDPENFWRSAGLPAFRWPDPNGTRLPNGAPPPAPPVAEGTPDHPGPAVPPGSPCSYTPAADSPPRPG NPLPCALSGQGPFGPVPDGFPAPLDVETSPPAPDGPPPSPGVPSAGRPGEAPPDVPGTPVPLPVHAPPGARTENPPDATG GSTR >Mature_484_residues MHAAMRTLTEFNRTRVGLMGALVTVLVVGVGQSFTSVPMLFATPTYYAQFTDAGGINVGDKVQIAGVNVGLVSSLVIRGD RVLVGFSMPGKTIGAQSRSAIRTDTFLGRKNMAIQPRGADPLPPHGIIPSGQTTTPYQIYDAFVDVTKAATDWNIDVVKR SLNVLSETFNQTAPHLKAALDGVARFSGTIGNRDEQIKQLLTNADKITRVLGDRSGQVDALLVNANTLLAAFRQRSQALS ALLSNVSAVSTQVSGFIKENPDAHQVLRQLGTVSDELVKRKKELSDVLVLVSRYTASLTEAVASGPFFKAIVANLLPYQV LQPWVDAAFKKRGIDPENFWRSAGLPAFRWPDPNGTRLPNGAPPPAPPVAEGTPDHPGPAVPPGSPCSYTPAADSPPRPG NPLPCALSGQGPFGPVPDGFPAPLDVETSPPAPDGPPPSPGVPSAGRPGEAPPDVPGTPVPLPVHAPPGARTENPPDATG GSTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50740; Mature: 50740
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAAMRTLTEFNRTRVGLMGALVTVLVVGVGQSFTSVPMLFATPTYYAQFTDAGGINVGD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCEEEECCCCCCCCCC KVQIAGVNVGLVSSLVIRGDRVLVGFSMPGKTIGAQSRSAIRTDTFLGRKNMAIQPRGAD EEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCC PLPPHGIIPSGQTTTPYQIYDAFVDVTKAATDWNIDVVKRSLNVLSETFNQTAPHLKAAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DGVARFSGTIGNRDEQIKQLLTNADKITRVLGDRSGQVDALLVNANTLLAAFRQRSQALS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHH ALLSNVSAVSTQVSGFIKENPDAHQVLRQLGTVSDELVKRKKELSDVLVLVSRYTASLTE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVASGPFFKAIVANLLPYQVLQPWVDAAFKKRGIDPENFWRSAGLPAFRWPDPNGTRLPN HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCC GAPPPAPPVAEGTPDHPGPAVPPGSPCSYTPAADSPPRPGNPLPCALSGQGPFGPVPDGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC PAPLDVETSPPAPDGPPPSPGVPSAGRPGEAPPDVPGTPVPLPVHAPPGARTENPPDATG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC GSTR CCCC >Mature Secondary Structure MHAAMRTLTEFNRTRVGLMGALVTVLVVGVGQSFTSVPMLFATPTYYAQFTDAGGINVGD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCEEEECCCCCCCCCC KVQIAGVNVGLVSSLVIRGDRVLVGFSMPGKTIGAQSRSAIRTDTFLGRKNMAIQPRGAD EEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCC PLPPHGIIPSGQTTTPYQIYDAFVDVTKAATDWNIDVVKRSLNVLSETFNQTAPHLKAAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH DGVARFSGTIGNRDEQIKQLLTNADKITRVLGDRSGQVDALLVNANTLLAAFRQRSQALS HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHH ALLSNVSAVSTQVSGFIKENPDAHQVLRQLGTVSDELVKRKKELSDVLVLVSRYTASLTE HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVASGPFFKAIVANLLPYQVLQPWVDAAFKKRGIDPENFWRSAGLPAFRWPDPNGTRLPN HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCC GAPPPAPPVAEGTPDHPGPAVPPGSPCSYTPAADSPPRPGNPLPCALSGQGPFGPVPDGF CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC PAPLDVETSPPAPDGPPPSPGVPSAGRPGEAPPDVPGTPVPLPVHAPPGARTENPPDATG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC GSTR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA