Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410154
Identifier: 41410154
GI number: 41410154
Start: 4516744
End: 4517136
Strand: Reverse
Name: 41410154
Synonym: MAP4056c
Alternate gene names: NA
Gene position: 4517136-4516744 (Counterclockwise)
Preceding gene: 41410155
Following gene: 41410146
Centisome position: 93.53
GC content: 71.76
Gene sequence:
>393_bases ATGCTGGCTACTATCGGTGCCGCCGCCGTTGCTGCTTTCGCGCTGGCCGCGCCCGCGCAGCTGTCCGCGCCCGCGCAGGC GGATCCCCCGCCGACGGCGCCCTACCCGACGCCGCGGACACCGTCGCCGCCGAGCGACTACGACGCGCCGTTCAAGAACA CCGTCAACGGCTTCGGCATCTACCAGCCGCAGGACCAGTTGGCGTGGCTGGGCAAGATCACCTGCGACCGGCTGGACCAC GGCGTCGACCACGACGCCCACCAGTCCGCGACCTTCATCCAGCGCAACCTGCCGCGCGGCACCTCCGAGGGCCAGTCGCT GCAGTTCCTCGGCGCGGCGGTGGACCACTACTGCCCCGAGCACATCGACGTCGTCCAGGCGGCCGGCCGGTAA
Upstream 100 bases:
>100_bases GGCGGGGCGCCGGGCGGCTGTCGCGGCTGATCGATCGGCGGGCACCGTTCAGCTGAACGACCCTGTCCAGGCGTGTATAG TCCGGCTAATGAAGGGAACG
Downstream 100 bases:
>100_bases GCACCGCTCAGCGCGGCGGCCGGTGGGCGGCGTGTAGCGCGACGATGCCGCCGGTCAGATTGCGCCAGCGCACCCCCGCC CAGCCGGCCCCGGCGATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MLATIGAAAVAAFALAAPAQLSAPAQADPPPTAPYPTPRTPSPPSDYDAPFKNTVNGFGIYQPQDQLAWLGKITCDRLDH GVDHDAHQSATFIQRNLPRGTSEGQSLQFLGAAVDHYCPEHIDVVQAAGR
Sequences:
>Translated_130_residues MLATIGAAAVAAFALAAPAQLSAPAQADPPPTAPYPTPRTPSPPSDYDAPFKNTVNGFGIYQPQDQLAWLGKITCDRLDH GVDHDAHQSATFIQRNLPRGTSEGQSLQFLGAAVDHYCPEHIDVVQAAGR >Mature_130_residues MLATIGAAAVAAFALAAPAQLSAPAQADPPPTAPYPTPRTPSPPSDYDAPFKNTVNGFGIYQPQDQLAWLGKITCDRLDH GVDHDAHQSATFIQRNLPRGTSEGQSLQFLGAAVDHYCPEHIDVVQAAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13730; Mature: 13730
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLATIGAAAVAAFALAAPAQLSAPAQADPPPTAPYPTPRTPSPPSDYDAPFKNTVNGFGI CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YQPQDQLAWLGKITCDRLDHGVDHDAHQSATFIQRNLPRGTSEGQSLQFLGAAVDHYCPE CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCH HIDVVQAAGR HHHHHHHCCC >Mature Secondary Structure MLATIGAAAVAAFALAAPAQLSAPAQADPPPTAPYPTPRTPSPPSDYDAPFKNTVNGFGI CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YQPQDQLAWLGKITCDRLDHGVDHDAHQSATFIQRNLPRGTSEGQSLQFLGAAVDHYCPE CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCH HIDVVQAAGR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA