| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is nudC [C]
Identifier: 41410082
GI number: 41410082
Start: 4442687
End: 4443187
Strand: Reverse
Name: nudC [C]
Synonym: MAP3984c
Alternate gene names: 41410082
Gene position: 4443187-4442687 (Counterclockwise)
Preceding gene: 41410083
Following gene: 41410075
Centisome position: 92.0
GC content: 70.46
Gene sequence:
>501_bases GTGACGCCGGTCCCGGATTTCATCGTCGAGCTTCGCCGGCGGATCGGTCATGCGCCGCTGTGGTTGCCCGGCATCACGGC CGTCACCATCCGCGGCCGAAAGGTGTTGCTGGTCAAGCGATCCGACAATGGCGCCTGGACGGCCGTGACGGGCATCGTGG AGCCGGGCGAGAATCCGGCCGACTGCGCCGCCCGCGAAGTGCGCGAGGAAACGGGGGTCAGCGCGCGGGCCACCCGGCTG GCGTGGGTGCACGTGACCCGGCCGGCCATCCACGCCAACGGCGACCACGCCCAGTACCTGGATCACGTGTTCCGGATGGA GTGGCTGTCCGGGGAGCCCTTCCCCGCCGACGACGAGAGCACCGCCGCCGCGTGGTTCGACCTCGATGAGCTTCCGCCGA TGACGGCGGACATGCGTCGGCGTATCACGTTGAGCGCCAACGACGATGAGCGGACCGTCTTCGACACCGACGGTCCGCCG CCGGCACGCCCGTCGGGCTAG
Upstream 100 bases:
>100_bases TCCGCGTCGAGATCGACGACCGGCGGTGGTCGGTGCTCGGGCACGCCGAAGTGGGGCTGCGCGGCGCCGAGGCACCCGCC GTCAACGAGCGGATCCCGGC
Downstream 100 bases:
>100_bases TTAGCCTTCCAGCTTGTAGCCCAGCCCGCGCACCGTCACCAGGTGCACCGGGTTGGCCGGGTCGGCTTCGATCTTGGAGC GCAGCCGCTTGACGTGCACG
Product: hypothetical protein
Products: AMP; NMNH. [C]
Alternate protein names: MutT/Nudix Family Protein; MutT/NUDIX-Family Protein; ADP-Ribose Pyrophosphatase; Phosphohydrolase; Mut-Like Protein; NUDIX Domain-Containing Protein; MutT/NUDIX-Protein; MutT/NUDIX Family Protein; NTP Pyrophosphohydrolase; MutT-Family Protein; MutT/Nudix Family Phosphohydrolase; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; Nudix Superfamily Hydrolase; NUDIX Protein; Hydrolase NUDIX Family; MutT/NUDIX Family Phosphohydrolase; MutT-Like Domain-Containing Protein
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTPVPDFIVELRRRIGHAPLWLPGITAVTIRGRKVLLVKRSDNGAWTAVTGIVEPGENPADCAAREVREETGVSARATRL AWVHVTRPAIHANGDHAQYLDHVFRMEWLSGEPFPADDESTAAAWFDLDELPPMTADMRRRITLSANDDERTVFDTDGPP PARPSG
Sequences:
>Translated_166_residues MTPVPDFIVELRRRIGHAPLWLPGITAVTIRGRKVLLVKRSDNGAWTAVTGIVEPGENPADCAAREVREETGVSARATRL AWVHVTRPAIHANGDHAQYLDHVFRMEWLSGEPFPADDESTAAAWFDLDELPPMTADMRRRITLSANDDERTVFDTDGPP PARPSG >Mature_165_residues TPVPDFIVELRRRIGHAPLWLPGITAVTIRGRKVLLVKRSDNGAWTAVTGIVEPGENPADCAAREVREETGVSARATRLA WVHVTRPAIHANGDHAQYLDHVFRMEWLSGEPFPADDESTAAAWFDLDELPPMTADMRRRITLSANDDERTVFDTDGPPP ARPSG
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 18358; Mature: 18227
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVPDFIVELRRRIGHAPLWLPGITAVTIRGRKVLLVKRSDNGAWTAVTGIVEPGENPA CCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCHH DCAAREVREETGVSARATRLAWVHVTRPAIHANGDHAQYLDHVFRMEWLSGEPFPADDES HHHHHHHHHHCCCCCHHEEEEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC TAAAWFDLDELPPMTADMRRRITLSANDDERTVFDTDGPPPARPSG CEEEEEEHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure TPVPDFIVELRRRIGHAPLWLPGITAVTIRGRKVLLVKRSDNGAWTAVTGIVEPGENPA CCCHHHHHHHHHHHCCCCEEECCCEEEEECCCEEEEEEECCCCCEEEEEEEECCCCCHH DCAAREVREETGVSARATRLAWVHVTRPAIHANGDHAQYLDHVFRMEWLSGEPFPADDES HHHHHHHHHHCCCCCHHEEEEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCC TAAAWFDLDELPPMTADMRRRITLSANDDERTVFDTDGPPPARPSG CEEEEEEHHHCCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; H2O [C]
Specific reaction: NADH + H2O = AMP + NMNH. [C]
General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA