Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is dipZ [H]

Identifier: 41410042

GI number: 41410042

Start: 4403473

End: 4405272

Strand: Reverse

Name: dipZ [H]

Synonym: MAP3944c

Alternate gene names: 41410042

Gene position: 4405272-4403473 (Counterclockwise)

Preceding gene: 41410046

Following gene: 41410038

Centisome position: 91.21

GC content: 71.06

Gene sequence:

>1800_bases
TTGTATAACGCACGTGGCGTGATTTGTCGTGGGCCACTGAGCCCCGCCGCGACGCGTCAAGCTGGACGGGTGCAGACCAT
CGCCCTGATCGGGTTCCTCGGCGGCCTGATCACCGGGATCTCGCCGTGCATCCTGCCGGTGCTGCCGGTGATCCTGCTGT
CCAGCATGGACGGCGACCGGCGCGGCGTGGGCTCCGCGGCGCGGCCCTACCTGGTGATCGCGGGCCTGGTGTGCAGCTTC
AGCGTGGCCACCCTGATCGGCTCGGCGCTGCTGACGGCGCTGCACCTGCCCCAGGATGCGATCCGGTGGACCGCCCTGGT
GGTGCTGACCGTCATCGGGCTGGGACTGATCTTCCCGCCGCTGCAGCAACTGATCGAGCGACCGTTCGCCTACCTGCCGC
AGCGCCAAAGTCGGCCCGGCGCAGACGGTTTCGGCCTGGGCCTGACGTTGGGCGCGCTGTACGTGCCGTGCGCCGGACCG
GTGCTTGCCGCGATCGTGGTGGCCGGCGGCACCTCCTCGATCGGCCCCGGCGCGCTGGTGTTGACCGCGACGTTCGCCGC
CGGAAACGCGCTGCCGCTGCTGGCCTTCGCGCTGGCCGGCCGGCGCGTCGCCCAGCGGGTCGCGGCGTTCCGCCGCCGGC
AGCGGGCGATACAGGTCGCCGGCGGGATCGCGATGATCGTGCTGGCCGTCGCGCTGGTGTTCAACCTGCCCGCGATGCTG
CAGCGTGCCGTCCCCGACTACACCACCGCGATGCAGAACCGGTTGGGCGCCAACGACATTCAGCGCAGTCTGAGCCCAGC
CGGGCCGCCGCCGACCCAGGGCGGCGCGCTGCAGCTGAGCCCGGACGACGTCACCGGCGGCGGGGCGCTGTCCGACTGTT
CCGACGGGTCGGCGGAGCTGCAGCGGTGCGGGCCGGCGCCCGCGCTCACCGGGATCACCGGGTGGCTCAACACCCCGGAC
GGCAAACCGCTCGACCCGGCGGTGGTGCGCGGCAAGGTGATCCTGATCGACTTCTGGGCATACTCGTGCATCAACTGCCA
GCGCGCCATCCCGCACGTAATCGATTGGTACGACCGGTATCACGACAGCGGATTCCTGGTCATCGGGGTGCACACCCCGG
AATACGCCTTCGAACGGGTCCCGGGCAACGTGGCCAGCGGCGCGGCCGACCTGCACATCGGCTATCCGATCGCCCTGGAC
AACGACTACGCGACGTGGAACAACTACCAGAACCTGTACTGGCCGGCCGAGTACCTGATCGACGCGACCGGGCAGGTGCG
GCACACCAAGTTCGGCGAAGGCGACTACGACGGCACCGAACGGCTGATCCGCGAACTGCTCACCGCCGCCCATCCCGGCG
CGCGGCTACCCGCCCCGGCGAACACCGCCGACACCACGCCGCAGTCCAGGCTCACCCCGGAGACCTACCTGGGGGTGGGC
AAGGCCGGAAACTACGGCGGCACCGGCGATTACCGGTCGGGCACCGCGACGCTGAGCTATCCGGCCACCCTGGGCGAGGA
CAGGTTCGCGCTGCGCGGGCGCTGGACGCTGGACGACCAGGGCGCCACCGCGGCCGGCGACGACTGCGCGGTCCGGCTGA
ACTACACCGCCAAAGACGTCTACGCCGTCGTCGGCGGCACCGGCACCCTGACCGTGACCCGGGACGGGACGACCACCACG
ACGCCGATCGGCGGGGCGCCCACCCTGCACCGGATCGTCGCCGACGACTCCGCGCACCGCGACCAGCTGGACATGCGCGT
CAGCCCAGGGCTGCAGGTCTTCTCGTTCACCTTCGGCTAG

Upstream 100 bases:

>100_bases
CTCCACGAGGGCCTCCGCACGTTGGCGCTTCTTCTCCTCGGTGCGGGCGCGCTGGAATGTTAGTTGCGCCACCGGCCGAG
CGTAACGCACATTATGTGAT

Downstream 100 bases:

>100_bases
CCGCACCGGCCAGGCCGCCCAGCACCGCCACCAGCACACCCAGCCCCGCCAGCGCCGCCCCGGCCAGCAGCGTGGCGTCG
AGCCATTGGTGCACACCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MYNARGVICRGPLSPAATRQAGRVQTIALIGFLGGLITGISPCILPVLPVILLSSMDGDRRGVGSAARPYLVIAGLVCSF
SVATLIGSALLTALHLPQDAIRWTALVVLTVIGLGLIFPPLQQLIERPFAYLPQRQSRPGADGFGLGLTLGALYVPCAGP
VLAAIVVAGGTSSIGPGALVLTATFAAGNALPLLAFALAGRRVAQRVAAFRRRQRAIQVAGGIAMIVLAVALVFNLPAML
QRAVPDYTTAMQNRLGANDIQRSLSPAGPPPTQGGALQLSPDDVTGGGALSDCSDGSAELQRCGPAPALTGITGWLNTPD
GKPLDPAVVRGKVILIDFWAYSCINCQRAIPHVIDWYDRYHDSGFLVIGVHTPEYAFERVPGNVASGAADLHIGYPIALD
NDYATWNNYQNLYWPAEYLIDATGQVRHTKFGEGDYDGTERLIRELLTAAHPGARLPAPANTADTTPQSRLTPETYLGVG
KAGNYGGTGDYRSGTATLSYPATLGEDRFALRGRWTLDDQGATAAGDDCAVRLNYTAKDVYAVVGGTGTLTVTRDGTTTT
TPIGGAPTLHRIVADDSAHRDQLDMRVSPGLQVFSFTFG

Sequences:

>Translated_599_residues
MYNARGVICRGPLSPAATRQAGRVQTIALIGFLGGLITGISPCILPVLPVILLSSMDGDRRGVGSAARPYLVIAGLVCSF
SVATLIGSALLTALHLPQDAIRWTALVVLTVIGLGLIFPPLQQLIERPFAYLPQRQSRPGADGFGLGLTLGALYVPCAGP
VLAAIVVAGGTSSIGPGALVLTATFAAGNALPLLAFALAGRRVAQRVAAFRRRQRAIQVAGGIAMIVLAVALVFNLPAML
QRAVPDYTTAMQNRLGANDIQRSLSPAGPPPTQGGALQLSPDDVTGGGALSDCSDGSAELQRCGPAPALTGITGWLNTPD
GKPLDPAVVRGKVILIDFWAYSCINCQRAIPHVIDWYDRYHDSGFLVIGVHTPEYAFERVPGNVASGAADLHIGYPIALD
NDYATWNNYQNLYWPAEYLIDATGQVRHTKFGEGDYDGTERLIRELLTAAHPGARLPAPANTADTTPQSRLTPETYLGVG
KAGNYGGTGDYRSGTATLSYPATLGEDRFALRGRWTLDDQGATAAGDDCAVRLNYTAKDVYAVVGGTGTLTVTRDGTTTT
TPIGGAPTLHRIVADDSAHRDQLDMRVSPGLQVFSFTFG
>Mature_599_residues
MYNARGVICRGPLSPAATRQAGRVQTIALIGFLGGLITGISPCILPVLPVILLSSMDGDRRGVGSAARPYLVIAGLVCSF
SVATLIGSALLTALHLPQDAIRWTALVVLTVIGLGLIFPPLQQLIERPFAYLPQRQSRPGADGFGLGLTLGALYVPCAGP
VLAAIVVAGGTSSIGPGALVLTATFAAGNALPLLAFALAGRRVAQRVAAFRRRQRAIQVAGGIAMIVLAVALVFNLPAML
QRAVPDYTTAMQNRLGANDIQRSLSPAGPPPTQGGALQLSPDDVTGGGALSDCSDGSAELQRCGPAPALTGITGWLNTPD
GKPLDPAVVRGKVILIDFWAYSCINCQRAIPHVIDWYDRYHDSGFLVIGVHTPEYAFERVPGNVASGAADLHIGYPIALD
NDYATWNNYQNLYWPAEYLIDATGQVRHTKFGEGDYDGTERLIRELLTAAHPGARLPAPANTADTTPQSRLTPETYLGVG
KAGNYGGTGDYRSGTATLSYPATLGEDRFALRGRWTLDDQGATAAGDDCAVRLNYTAKDVYAVVGGTGTLTVTRDGTTTT
TPIGGAPTLHRIVADDSAHRDQLDMRVSPGLQVFSFTFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42476013, Length=124, Percent_Identity=30.6451612903226, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI116007528, Length=121, Percent_Identity=33.0578512396694, Blast_Score=72, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR003834
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]

EC number: NA

Molecular weight: Translated: 62924; Mature: 62924

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNARGVICRGPLSPAATRQAGRVQTIALIGFLGGLITGISPCILPVLPVILLSSMDGDR
CCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RGVGSAARPYLVIAGLVCSFSVATLIGSALLTALHLPQDAIRWTALVVLTVIGLGLIFPP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LQQLIERPFAYLPQRQSRPGADGFGLGLTLGALYVPCAGPVLAAIVVAGGTSSIGPGALV
HHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEE
LTATFAAGNALPLLAFALAGRRVAQRVAAFRRRQRAIQVAGGIAMIVLAVALVFNLPAML
EEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHH
QRAVPDYTTAMQNRLGANDIQRSLSPAGPPPTQGGALQLSPDDVTGGGALSDCSDGSAEL
HHHCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH
QRCGPAPALTGITGWLNTPDGKPLDPAVVRGKVILIDFWAYSCINCQRAIPHVIDWYDRY
HHCCCCCCHHCCCCCCCCCCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHH
HDSGFLVIGVHTPEYAFERVPGNVASGAADLHIGYPIALDNDYATWNNYQNLYWPAEYLI
CCCCEEEEEECCCHHHHHHCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCEECHHHHC
DATGQVRHTKFGEGDYDGTERLIRELLTAAHPGARLPAPANTADTTPQSRLTPETYLGVG
CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
KAGNYGGTGDYRSGTATLSYPATLGEDRFALRGRWTLDDQGATAAGDDCAVRLNYTAKDV
CCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCEE
YAVVGGTGTLTVTRDGTTTTTPIGGAPTLHRIVADDSAHRDQLDMRVSPGLQVFSFTFG
EEEECCCEEEEEEECCCEECCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCEEEEEECC
>Mature Secondary Structure
MYNARGVICRGPLSPAATRQAGRVQTIALIGFLGGLITGISPCILPVLPVILLSSMDGDR
CCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RGVGSAARPYLVIAGLVCSFSVATLIGSALLTALHLPQDAIRWTALVVLTVIGLGLIFPP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LQQLIERPFAYLPQRQSRPGADGFGLGLTLGALYVPCAGPVLAAIVVAGGTSSIGPGALV
HHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEE
LTATFAAGNALPLLAFALAGRRVAQRVAAFRRRQRAIQVAGGIAMIVLAVALVFNLPAML
EEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHH
QRAVPDYTTAMQNRLGANDIQRSLSPAGPPPTQGGALQLSPDDVTGGGALSDCSDGSAEL
HHHCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH
QRCGPAPALTGITGWLNTPDGKPLDPAVVRGKVILIDFWAYSCINCQRAIPHVIDWYDRY
HHCCCCCCHHCCCCCCCCCCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHH
HDSGFLVIGVHTPEYAFERVPGNVASGAADLHIGYPIALDNDYATWNNYQNLYWPAEYLI
CCCCEEEEEECCCHHHHHHCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCEECHHHHC
DATGQVRHTKFGEGDYDGTERLIRELLTAAHPGARLPAPANTADTTPQSRLTPETYLGVG
CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC
KAGNYGGTGDYRSGTATLSYPATLGEDRFALRGRWTLDDQGATAAGDDCAVRLNYTAKDV
CCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCEE
YAVVGGTGTLTVTRDGTTTTTPIGGAPTLHRIVADDSAHRDQLDMRVSPGLQVFSFTFG
EEEECCCEEEEEEECCCEECCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]