| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is dipZ [H]
Identifier: 41410042
GI number: 41410042
Start: 4403473
End: 4405272
Strand: Reverse
Name: dipZ [H]
Synonym: MAP3944c
Alternate gene names: 41410042
Gene position: 4405272-4403473 (Counterclockwise)
Preceding gene: 41410046
Following gene: 41410038
Centisome position: 91.21
GC content: 71.06
Gene sequence:
>1800_bases TTGTATAACGCACGTGGCGTGATTTGTCGTGGGCCACTGAGCCCCGCCGCGACGCGTCAAGCTGGACGGGTGCAGACCAT CGCCCTGATCGGGTTCCTCGGCGGCCTGATCACCGGGATCTCGCCGTGCATCCTGCCGGTGCTGCCGGTGATCCTGCTGT CCAGCATGGACGGCGACCGGCGCGGCGTGGGCTCCGCGGCGCGGCCCTACCTGGTGATCGCGGGCCTGGTGTGCAGCTTC AGCGTGGCCACCCTGATCGGCTCGGCGCTGCTGACGGCGCTGCACCTGCCCCAGGATGCGATCCGGTGGACCGCCCTGGT GGTGCTGACCGTCATCGGGCTGGGACTGATCTTCCCGCCGCTGCAGCAACTGATCGAGCGACCGTTCGCCTACCTGCCGC AGCGCCAAAGTCGGCCCGGCGCAGACGGTTTCGGCCTGGGCCTGACGTTGGGCGCGCTGTACGTGCCGTGCGCCGGACCG GTGCTTGCCGCGATCGTGGTGGCCGGCGGCACCTCCTCGATCGGCCCCGGCGCGCTGGTGTTGACCGCGACGTTCGCCGC CGGAAACGCGCTGCCGCTGCTGGCCTTCGCGCTGGCCGGCCGGCGCGTCGCCCAGCGGGTCGCGGCGTTCCGCCGCCGGC AGCGGGCGATACAGGTCGCCGGCGGGATCGCGATGATCGTGCTGGCCGTCGCGCTGGTGTTCAACCTGCCCGCGATGCTG CAGCGTGCCGTCCCCGACTACACCACCGCGATGCAGAACCGGTTGGGCGCCAACGACATTCAGCGCAGTCTGAGCCCAGC CGGGCCGCCGCCGACCCAGGGCGGCGCGCTGCAGCTGAGCCCGGACGACGTCACCGGCGGCGGGGCGCTGTCCGACTGTT CCGACGGGTCGGCGGAGCTGCAGCGGTGCGGGCCGGCGCCCGCGCTCACCGGGATCACCGGGTGGCTCAACACCCCGGAC GGCAAACCGCTCGACCCGGCGGTGGTGCGCGGCAAGGTGATCCTGATCGACTTCTGGGCATACTCGTGCATCAACTGCCA GCGCGCCATCCCGCACGTAATCGATTGGTACGACCGGTATCACGACAGCGGATTCCTGGTCATCGGGGTGCACACCCCGG AATACGCCTTCGAACGGGTCCCGGGCAACGTGGCCAGCGGCGCGGCCGACCTGCACATCGGCTATCCGATCGCCCTGGAC AACGACTACGCGACGTGGAACAACTACCAGAACCTGTACTGGCCGGCCGAGTACCTGATCGACGCGACCGGGCAGGTGCG GCACACCAAGTTCGGCGAAGGCGACTACGACGGCACCGAACGGCTGATCCGCGAACTGCTCACCGCCGCCCATCCCGGCG CGCGGCTACCCGCCCCGGCGAACACCGCCGACACCACGCCGCAGTCCAGGCTCACCCCGGAGACCTACCTGGGGGTGGGC AAGGCCGGAAACTACGGCGGCACCGGCGATTACCGGTCGGGCACCGCGACGCTGAGCTATCCGGCCACCCTGGGCGAGGA CAGGTTCGCGCTGCGCGGGCGCTGGACGCTGGACGACCAGGGCGCCACCGCGGCCGGCGACGACTGCGCGGTCCGGCTGA ACTACACCGCCAAAGACGTCTACGCCGTCGTCGGCGGCACCGGCACCCTGACCGTGACCCGGGACGGGACGACCACCACG ACGCCGATCGGCGGGGCGCCCACCCTGCACCGGATCGTCGCCGACGACTCCGCGCACCGCGACCAGCTGGACATGCGCGT CAGCCCAGGGCTGCAGGTCTTCTCGTTCACCTTCGGCTAG
Upstream 100 bases:
>100_bases CTCCACGAGGGCCTCCGCACGTTGGCGCTTCTTCTCCTCGGTGCGGGCGCGCTGGAATGTTAGTTGCGCCACCGGCCGAG CGTAACGCACATTATGTGAT
Downstream 100 bases:
>100_bases CCGCACCGGCCAGGCCGCCCAGCACCGCCACCAGCACACCCAGCCCCGCCAGCGCCGCCCCGGCCAGCAGCGTGGCGTCG AGCCATTGGTGCACACCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MYNARGVICRGPLSPAATRQAGRVQTIALIGFLGGLITGISPCILPVLPVILLSSMDGDRRGVGSAARPYLVIAGLVCSF SVATLIGSALLTALHLPQDAIRWTALVVLTVIGLGLIFPPLQQLIERPFAYLPQRQSRPGADGFGLGLTLGALYVPCAGP VLAAIVVAGGTSSIGPGALVLTATFAAGNALPLLAFALAGRRVAQRVAAFRRRQRAIQVAGGIAMIVLAVALVFNLPAML QRAVPDYTTAMQNRLGANDIQRSLSPAGPPPTQGGALQLSPDDVTGGGALSDCSDGSAELQRCGPAPALTGITGWLNTPD GKPLDPAVVRGKVILIDFWAYSCINCQRAIPHVIDWYDRYHDSGFLVIGVHTPEYAFERVPGNVASGAADLHIGYPIALD NDYATWNNYQNLYWPAEYLIDATGQVRHTKFGEGDYDGTERLIRELLTAAHPGARLPAPANTADTTPQSRLTPETYLGVG KAGNYGGTGDYRSGTATLSYPATLGEDRFALRGRWTLDDQGATAAGDDCAVRLNYTAKDVYAVVGGTGTLTVTRDGTTTT TPIGGAPTLHRIVADDSAHRDQLDMRVSPGLQVFSFTFG
Sequences:
>Translated_599_residues MYNARGVICRGPLSPAATRQAGRVQTIALIGFLGGLITGISPCILPVLPVILLSSMDGDRRGVGSAARPYLVIAGLVCSF SVATLIGSALLTALHLPQDAIRWTALVVLTVIGLGLIFPPLQQLIERPFAYLPQRQSRPGADGFGLGLTLGALYVPCAGP VLAAIVVAGGTSSIGPGALVLTATFAAGNALPLLAFALAGRRVAQRVAAFRRRQRAIQVAGGIAMIVLAVALVFNLPAML QRAVPDYTTAMQNRLGANDIQRSLSPAGPPPTQGGALQLSPDDVTGGGALSDCSDGSAELQRCGPAPALTGITGWLNTPD GKPLDPAVVRGKVILIDFWAYSCINCQRAIPHVIDWYDRYHDSGFLVIGVHTPEYAFERVPGNVASGAADLHIGYPIALD NDYATWNNYQNLYWPAEYLIDATGQVRHTKFGEGDYDGTERLIRELLTAAHPGARLPAPANTADTTPQSRLTPETYLGVG KAGNYGGTGDYRSGTATLSYPATLGEDRFALRGRWTLDDQGATAAGDDCAVRLNYTAKDVYAVVGGTGTLTVTRDGTTTT TPIGGAPTLHRIVADDSAHRDQLDMRVSPGLQVFSFTFG >Mature_599_residues MYNARGVICRGPLSPAATRQAGRVQTIALIGFLGGLITGISPCILPVLPVILLSSMDGDRRGVGSAARPYLVIAGLVCSF SVATLIGSALLTALHLPQDAIRWTALVVLTVIGLGLIFPPLQQLIERPFAYLPQRQSRPGADGFGLGLTLGALYVPCAGP VLAAIVVAGGTSSIGPGALVLTATFAAGNALPLLAFALAGRRVAQRVAAFRRRQRAIQVAGGIAMIVLAVALVFNLPAML QRAVPDYTTAMQNRLGANDIQRSLSPAGPPPTQGGALQLSPDDVTGGGALSDCSDGSAELQRCGPAPALTGITGWLNTPD GKPLDPAVVRGKVILIDFWAYSCINCQRAIPHVIDWYDRYHDSGFLVIGVHTPEYAFERVPGNVASGAADLHIGYPIALD NDYATWNNYQNLYWPAEYLIDATGQVRHTKFGEGDYDGTERLIRELLTAAHPGARLPAPANTADTTPQSRLTPETYLGVG KAGNYGGTGDYRSGTATLSYPATLGEDRFALRGRWTLDDQGATAAGDDCAVRLNYTAKDVYAVVGGTGTLTVTRDGTTTT TPIGGAPTLHRIVADDSAHRDQLDMRVSPGLQVFSFTFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI42476013, Length=124, Percent_Identity=30.6451612903226, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI116007528, Length=121, Percent_Identity=33.0578512396694, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR003834 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA; PF02683 DsbD [H]
EC number: NA
Molecular weight: Translated: 62924; Mature: 62924
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNARGVICRGPLSPAATRQAGRVQTIALIGFLGGLITGISPCILPVLPVILLSSMDGDR CCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RGVGSAARPYLVIAGLVCSFSVATLIGSALLTALHLPQDAIRWTALVVLTVIGLGLIFPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LQQLIERPFAYLPQRQSRPGADGFGLGLTLGALYVPCAGPVLAAIVVAGGTSSIGPGALV HHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEE LTATFAAGNALPLLAFALAGRRVAQRVAAFRRRQRAIQVAGGIAMIVLAVALVFNLPAML EEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHH QRAVPDYTTAMQNRLGANDIQRSLSPAGPPPTQGGALQLSPDDVTGGGALSDCSDGSAEL HHHCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH QRCGPAPALTGITGWLNTPDGKPLDPAVVRGKVILIDFWAYSCINCQRAIPHVIDWYDRY HHCCCCCCHHCCCCCCCCCCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHH HDSGFLVIGVHTPEYAFERVPGNVASGAADLHIGYPIALDNDYATWNNYQNLYWPAEYLI CCCCEEEEEECCCHHHHHHCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCEECHHHHC DATGQVRHTKFGEGDYDGTERLIRELLTAAHPGARLPAPANTADTTPQSRLTPETYLGVG CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC KAGNYGGTGDYRSGTATLSYPATLGEDRFALRGRWTLDDQGATAAGDDCAVRLNYTAKDV CCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCEE YAVVGGTGTLTVTRDGTTTTTPIGGAPTLHRIVADDSAHRDQLDMRVSPGLQVFSFTFG EEEECCCEEEEEEECCCEECCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCEEEEEECC >Mature Secondary Structure MYNARGVICRGPLSPAATRQAGRVQTIALIGFLGGLITGISPCILPVLPVILLSSMDGDR CCCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RGVGSAARPYLVIAGLVCSFSVATLIGSALLTALHLPQDAIRWTALVVLTVIGLGLIFPP CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LQQLIERPFAYLPQRQSRPGADGFGLGLTLGALYVPCAGPVLAAIVVAGGTSSIGPGALV HHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCEEE LTATFAAGNALPLLAFALAGRRVAQRVAAFRRRQRAIQVAGGIAMIVLAVALVFNLPAML EEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHH QRAVPDYTTAMQNRLGANDIQRSLSPAGPPPTQGGALQLSPDDVTGGGALSDCSDGSAEL HHHCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHH QRCGPAPALTGITGWLNTPDGKPLDPAVVRGKVILIDFWAYSCINCQRAIPHVIDWYDRY HHCCCCCCHHCCCCCCCCCCCCCCCHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHH HDSGFLVIGVHTPEYAFERVPGNVASGAADLHIGYPIALDNDYATWNNYQNLYWPAEYLI CCCCEEEEEECCCHHHHHHCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCEECHHHHC DATGQVRHTKFGEGDYDGTERLIRELLTAAHPGARLPAPANTADTTPQSRLTPETYLGVG CCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC KAGNYGGTGDYRSGTATLSYPATLGEDRFALRGRWTLDDQGATAAGDDCAVRLNYTAKDV CCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEECCCCEE YAVVGGTGTLTVTRDGTTTTTPIGGAPTLHRIVADDSAHRDQLDMRVSPGLQVFSFTFG EEEECCCEEEEEEECCCEECCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]