Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410000
Identifier: 41410000
GI number: 41410000
Start: 4365829
End: 4366350
Strand: Reverse
Name: 41410000
Synonym: MAP3902c
Alternate gene names: NA
Gene position: 4366350-4365829 (Counterclockwise)
Preceding gene: 41410001
Following gene: 41409995
Centisome position: 90.4
GC content: 67.05
Gene sequence:
>522_bases ATGTCATATCGGAACACCGCGCTGCGTCTGGTGTCGGCCGCAGCTTTCACCGGCAGTGTGGCTCTCGCGGGTAGCGCCCC CGCACTCGCCGAACCCAACACCGGCAGCGCCTCGGACATGAACACGCTGGCGGCGGCGCTGTCGAAAGGCTATGGCCTGA ACAACTGCAAGCCGCAGGAACTGACCGAGTCCGGCGAGCTGGCCGAGCTGCTGTGCGGGCAGAGCCCCGACCCCAGCGGA CCGGGGTCGGGCGTCTACGCCCTATTCTCCAACGGCACCAACCTGGCGTCCGCGTTCAGCTCCACCATCAAGGACGTGTC GCTGGCCAACTGCGGAGACGCCGGGCAGTCGCCGGGCACCTGGAAGCAGAACGGCCAGACGGGTGGTCAGATCGCCTGCG GCACTTACAAGAACTACGCGACGCTGACCTGGACCACCGACGCCAAGAACGTGCTGGGCCACCTGACCGCGGCCAACTCC GACGTCAACGCCCTCTACCAGTGGTGGCGCACCAACGGCTGA
Upstream 100 bases:
>100_bases ACACCGATGTCGCGGCGCTCTACCACTGGTGGCGCGCCAACGGGTGAGCGCCAAGATGCGTTCGCCCGCTTTGTTTCCAT CAACCGCAGGGAGTCAGAAA
Downstream 100 bases:
>100_bases CGTTTACAGTCGCGCCGCAATCAATTCCGCCACCGCACGCATCCCGGCGGCATTGGGGTGCAACGGCGCGGGCCGGCCCG GTAGCGGGAGACCGTAGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSYRNTALRLVSAAAFTGSVALAGSAPALAEPNTGSASDMNTLAAALSKGYGLNNCKPQELTESGELAELLCGQSPDPSG PGSGVYALFSNGTNLASAFSSTIKDVSLANCGDAGQSPGTWKQNGQTGGQIACGTYKNYATLTWTTDAKNVLGHLTAANS DVNALYQWWRTNG
Sequences:
>Translated_173_residues MSYRNTALRLVSAAAFTGSVALAGSAPALAEPNTGSASDMNTLAAALSKGYGLNNCKPQELTESGELAELLCGQSPDPSG PGSGVYALFSNGTNLASAFSSTIKDVSLANCGDAGQSPGTWKQNGQTGGQIACGTYKNYATLTWTTDAKNVLGHLTAANS DVNALYQWWRTNG >Mature_172_residues SYRNTALRLVSAAAFTGSVALAGSAPALAEPNTGSASDMNTLAAALSKGYGLNNCKPQELTESGELAELLCGQSPDPSGP GSGVYALFSNGTNLASAFSSTIKDVSLANCGDAGQSPGTWKQNGQTGGQIACGTYKNYATLTWTTDAKNVLGHLTAANSD VNALYQWWRTNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17705; Mature: 17573
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRNTALRLVSAAAFTGSVALAGSAPALAEPNTGSASDMNTLAAALSKGYGLNNCKPQE CCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH LTESGELAELLCGQSPDPSGPGSGVYALFSNGTNLASAFSSTIKDVSLANCGDAGQSPGT HCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC WKQNGQTGGQIACGTYKNYATLTWTTDAKNVLGHLTAANSDVNALYQWWRTNG CCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHCCC >Mature Secondary Structure SYRNTALRLVSAAAFTGSVALAGSAPALAEPNTGSASDMNTLAAALSKGYGLNNCKPQE CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH LTESGELAELLCGQSPDPSGPGSGVYALFSNGTNLASAFSSTIKDVSLANCGDAGQSPGT HCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC WKQNGQTGGQIACGTYKNYATLTWTTDAKNVLGHLTAANSDVNALYQWWRTNG CCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA