Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41410000

Identifier: 41410000

GI number: 41410000

Start: 4365829

End: 4366350

Strand: Reverse

Name: 41410000

Synonym: MAP3902c

Alternate gene names: NA

Gene position: 4366350-4365829 (Counterclockwise)

Preceding gene: 41410001

Following gene: 41409995

Centisome position: 90.4

GC content: 67.05

Gene sequence:

>522_bases
ATGTCATATCGGAACACCGCGCTGCGTCTGGTGTCGGCCGCAGCTTTCACCGGCAGTGTGGCTCTCGCGGGTAGCGCCCC
CGCACTCGCCGAACCCAACACCGGCAGCGCCTCGGACATGAACACGCTGGCGGCGGCGCTGTCGAAAGGCTATGGCCTGA
ACAACTGCAAGCCGCAGGAACTGACCGAGTCCGGCGAGCTGGCCGAGCTGCTGTGCGGGCAGAGCCCCGACCCCAGCGGA
CCGGGGTCGGGCGTCTACGCCCTATTCTCCAACGGCACCAACCTGGCGTCCGCGTTCAGCTCCACCATCAAGGACGTGTC
GCTGGCCAACTGCGGAGACGCCGGGCAGTCGCCGGGCACCTGGAAGCAGAACGGCCAGACGGGTGGTCAGATCGCCTGCG
GCACTTACAAGAACTACGCGACGCTGACCTGGACCACCGACGCCAAGAACGTGCTGGGCCACCTGACCGCGGCCAACTCC
GACGTCAACGCCCTCTACCAGTGGTGGCGCACCAACGGCTGA

Upstream 100 bases:

>100_bases
ACACCGATGTCGCGGCGCTCTACCACTGGTGGCGCGCCAACGGGTGAGCGCCAAGATGCGTTCGCCCGCTTTGTTTCCAT
CAACCGCAGGGAGTCAGAAA

Downstream 100 bases:

>100_bases
CGTTTACAGTCGCGCCGCAATCAATTCCGCCACCGCACGCATCCCGGCGGCATTGGGGTGCAACGGCGCGGGCCGGCCCG
GTAGCGGGAGACCGTAGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSYRNTALRLVSAAAFTGSVALAGSAPALAEPNTGSASDMNTLAAALSKGYGLNNCKPQELTESGELAELLCGQSPDPSG
PGSGVYALFSNGTNLASAFSSTIKDVSLANCGDAGQSPGTWKQNGQTGGQIACGTYKNYATLTWTTDAKNVLGHLTAANS
DVNALYQWWRTNG

Sequences:

>Translated_173_residues
MSYRNTALRLVSAAAFTGSVALAGSAPALAEPNTGSASDMNTLAAALSKGYGLNNCKPQELTESGELAELLCGQSPDPSG
PGSGVYALFSNGTNLASAFSSTIKDVSLANCGDAGQSPGTWKQNGQTGGQIACGTYKNYATLTWTTDAKNVLGHLTAANS
DVNALYQWWRTNG
>Mature_172_residues
SYRNTALRLVSAAAFTGSVALAGSAPALAEPNTGSASDMNTLAAALSKGYGLNNCKPQELTESGELAELLCGQSPDPSGP
GSGVYALFSNGTNLASAFSSTIKDVSLANCGDAGQSPGTWKQNGQTGGQIACGTYKNYATLTWTTDAKNVLGHLTAANSD
VNALYQWWRTNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17705; Mature: 17573

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRNTALRLVSAAAFTGSVALAGSAPALAEPNTGSASDMNTLAAALSKGYGLNNCKPQE
CCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH
LTESGELAELLCGQSPDPSGPGSGVYALFSNGTNLASAFSSTIKDVSLANCGDAGQSPGT
HCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
WKQNGQTGGQIACGTYKNYATLTWTTDAKNVLGHLTAANSDVNALYQWWRTNG
CCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SYRNTALRLVSAAAFTGSVALAGSAPALAEPNTGSASDMNTLAAALSKGYGLNNCKPQE
CCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH
LTESGELAELLCGQSPDPSGPGSGVYALFSNGTNLASAFSSTIKDVSLANCGDAGQSPGT
HCCCCHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
WKQNGQTGGQIACGTYKNYATLTWTTDAKNVLGHLTAANSDVNALYQWWRTNG
CCCCCCCCCEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA