Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41409961
Identifier: 41409961
GI number: 41409961
Start: 4325271
End: 4326152
Strand: Reverse
Name: 41409961
Synonym: MAP3863c
Alternate gene names: NA
Gene position: 4326152-4325271 (Counterclockwise)
Preceding gene: 41409963
Following gene: 41409960
Centisome position: 89.57
GC content: 69.39
Gene sequence:
>882_bases ATGCCCAACCCACCCGAACCCGGCCGCGGCGGCCCGCCGAAACGGCCCGGGTTCGACCCACGCGCGTCTCGCGCGAGCGA CGAGTGGACGCCCGAGACCGGCGAGGAGCCCGACGGCGGCTTCGACAGCAGCGAAGACGCCACCGAGAGCGTCCCGATGG TCCCGAGCGACGCCGAAACCGAGACCGTGGTGATCAACAAACCCGATCCGCCCAGCGGCCCGCAGGAGACGCCGGACGGC CCGCAGCGCGAACGCCGGTTCACCGCGCCGGGCTTCGACGCGAAGGAAACCACGATCATCGCCACCACCCCGGAGCCGGC CACCGAGGCGTTCGTTCCGCCCGGGCAGGACAACACCACCCAGTTCGGGGTTCCACCCAAAGCCGCTGTCCCACAATCGA TTCCACCTCGGCTCGGCGGGAAACTGCGCACCTCCCGGCAAATCAACTGGGGCTGGATACTGGCGCTGGTGGTGATCGTG CTGGCGCTGGCGGCGATCGCGATCCTGGGCACCGTGCTGCTCACCCGCGGCAGGCACACCAACGTCTCGCAGGAGGATCA GGTCCGGCACACCATCGGCAACTTCGACGCCGCCATCCAGCGCGGTGACCTGACCACGCTGCGCAGCATCACCTGCGGCA CCACCCGCGACGGCTACGCCGACTACGACGAACACGCCTGGGCGGAGACCTATCGCCGGGTCTCGGCGGCCAAGCAGTAC CCGGTGATCGCCAGCATCGACCAGGTGGTGGTCAACGGCCAGCACGCCGAGGCGAACGTCACCACCTTCATGGCCTACGA CCCGCAGGTGCGCTCCACCCGCAGCCTGGACCTGCAGTACCGCGACGACCAGTGGAAGATCTGCCAGTCCGCCAGCGGAT AG
Upstream 100 bases:
>100_bases TCTCGCCCGCGGGACGCACCTCTACCATCGCCCCGAGCGGGGTACTCGGTCGCTAAGCTCTGCAACTACCCCACTCGACA GCGGGAGGACAGTAGTACTC
Downstream 100 bases:
>100_bases CCATGATTGCCGGTGCGACCGGTATGTTTGAGGCATCATGAGCACCGCCGTGACGGCCCTGCCCGACATCCTCGACCCGA TGTATTGGTTGGGCGCCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPNPPEPGRGGPPKRPGFDPRASRASDEWTPETGEEPDGGFDSSEDATESVPMVPSDAETETVVINKPDPPSGPQETPDG PQRERRFTAPGFDAKETTIIATTPEPATEAFVPPGQDNTTQFGVPPKAAVPQSIPPRLGGKLRTSRQINWGWILALVVIV LALAAIAILGTVLLTRGRHTNVSQEDQVRHTIGNFDAAIQRGDLTTLRSITCGTTRDGYADYDEHAWAETYRRVSAAKQY PVIASIDQVVVNGQHAEANVTTFMAYDPQVRSTRSLDLQYRDDQWKICQSASG
Sequences:
>Translated_293_residues MPNPPEPGRGGPPKRPGFDPRASRASDEWTPETGEEPDGGFDSSEDATESVPMVPSDAETETVVINKPDPPSGPQETPDG PQRERRFTAPGFDAKETTIIATTPEPATEAFVPPGQDNTTQFGVPPKAAVPQSIPPRLGGKLRTSRQINWGWILALVVIV LALAAIAILGTVLLTRGRHTNVSQEDQVRHTIGNFDAAIQRGDLTTLRSITCGTTRDGYADYDEHAWAETYRRVSAAKQY PVIASIDQVVVNGQHAEANVTTFMAYDPQVRSTRSLDLQYRDDQWKICQSASG >Mature_292_residues PNPPEPGRGGPPKRPGFDPRASRASDEWTPETGEEPDGGFDSSEDATESVPMVPSDAETETVVINKPDPPSGPQETPDGP QRERRFTAPGFDAKETTIIATTPEPATEAFVPPGQDNTTQFGVPPKAAVPQSIPPRLGGKLRTSRQINWGWILALVVIVL ALAAIAILGTVLLTRGRHTNVSQEDQVRHTIGNFDAAIQRGDLTTLRSITCGTTRDGYADYDEHAWAETYRRVSAAKQYP VIASIDQVVVNGQHAEANVTTFMAYDPQVRSTRSLDLQYRDDQWKICQSASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31813; Mature: 31682
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNPPEPGRGGPPKRPGFDPRASRASDEWTPETGEEPDGGFDSSEDATESVPMVPSDAET CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC ETVVINKPDPPSGPQETPDGPQRERRFTAPGFDAKETTIIATTPEPATEAFVPPGQDNTT CEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCE QFGVPPKAAVPQSIPPRLGGKLRTSRQINWGWILALVVIVLALAAIAILGTVLLTRGRHT ECCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NVSQEDQVRHTIGNFDAAIQRGDLTTLRSITCGTTRDGYADYDEHAWAETYRRVSAAKQY CCCHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC PVIASIDQVVVNGQHAEANVTTFMAYDPQVRSTRSLDLQYRDDQWKICQSASG CHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHCCCC >Mature Secondary Structure PNPPEPGRGGPPKRPGFDPRASRASDEWTPETGEEPDGGFDSSEDATESVPMVPSDAET CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC ETVVINKPDPPSGPQETPDGPQRERRFTAPGFDAKETTIIATTPEPATEAFVPPGQDNTT CEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCE QFGVPPKAAVPQSIPPRLGGKLRTSRQINWGWILALVVIVLALAAIAILGTVLLTRGRHT ECCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NVSQEDQVRHTIGNFDAAIQRGDLTTLRSITCGTTRDGYADYDEHAWAETYRRVSAAKQY CCCHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC PVIASIDQVVVNGQHAEANVTTFMAYDPQVRSTRSLDLQYRDDQWKICQSASG CHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA