Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409961

Identifier: 41409961

GI number: 41409961

Start: 4325271

End: 4326152

Strand: Reverse

Name: 41409961

Synonym: MAP3863c

Alternate gene names: NA

Gene position: 4326152-4325271 (Counterclockwise)

Preceding gene: 41409963

Following gene: 41409960

Centisome position: 89.57

GC content: 69.39

Gene sequence:

>882_bases
ATGCCCAACCCACCCGAACCCGGCCGCGGCGGCCCGCCGAAACGGCCCGGGTTCGACCCACGCGCGTCTCGCGCGAGCGA
CGAGTGGACGCCCGAGACCGGCGAGGAGCCCGACGGCGGCTTCGACAGCAGCGAAGACGCCACCGAGAGCGTCCCGATGG
TCCCGAGCGACGCCGAAACCGAGACCGTGGTGATCAACAAACCCGATCCGCCCAGCGGCCCGCAGGAGACGCCGGACGGC
CCGCAGCGCGAACGCCGGTTCACCGCGCCGGGCTTCGACGCGAAGGAAACCACGATCATCGCCACCACCCCGGAGCCGGC
CACCGAGGCGTTCGTTCCGCCCGGGCAGGACAACACCACCCAGTTCGGGGTTCCACCCAAAGCCGCTGTCCCACAATCGA
TTCCACCTCGGCTCGGCGGGAAACTGCGCACCTCCCGGCAAATCAACTGGGGCTGGATACTGGCGCTGGTGGTGATCGTG
CTGGCGCTGGCGGCGATCGCGATCCTGGGCACCGTGCTGCTCACCCGCGGCAGGCACACCAACGTCTCGCAGGAGGATCA
GGTCCGGCACACCATCGGCAACTTCGACGCCGCCATCCAGCGCGGTGACCTGACCACGCTGCGCAGCATCACCTGCGGCA
CCACCCGCGACGGCTACGCCGACTACGACGAACACGCCTGGGCGGAGACCTATCGCCGGGTCTCGGCGGCCAAGCAGTAC
CCGGTGATCGCCAGCATCGACCAGGTGGTGGTCAACGGCCAGCACGCCGAGGCGAACGTCACCACCTTCATGGCCTACGA
CCCGCAGGTGCGCTCCACCCGCAGCCTGGACCTGCAGTACCGCGACGACCAGTGGAAGATCTGCCAGTCCGCCAGCGGAT
AG

Upstream 100 bases:

>100_bases
TCTCGCCCGCGGGACGCACCTCTACCATCGCCCCGAGCGGGGTACTCGGTCGCTAAGCTCTGCAACTACCCCACTCGACA
GCGGGAGGACAGTAGTACTC

Downstream 100 bases:

>100_bases
CCATGATTGCCGGTGCGACCGGTATGTTTGAGGCATCATGAGCACCGCCGTGACGGCCCTGCCCGACATCCTCGACCCGA
TGTATTGGTTGGGCGCCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPNPPEPGRGGPPKRPGFDPRASRASDEWTPETGEEPDGGFDSSEDATESVPMVPSDAETETVVINKPDPPSGPQETPDG
PQRERRFTAPGFDAKETTIIATTPEPATEAFVPPGQDNTTQFGVPPKAAVPQSIPPRLGGKLRTSRQINWGWILALVVIV
LALAAIAILGTVLLTRGRHTNVSQEDQVRHTIGNFDAAIQRGDLTTLRSITCGTTRDGYADYDEHAWAETYRRVSAAKQY
PVIASIDQVVVNGQHAEANVTTFMAYDPQVRSTRSLDLQYRDDQWKICQSASG

Sequences:

>Translated_293_residues
MPNPPEPGRGGPPKRPGFDPRASRASDEWTPETGEEPDGGFDSSEDATESVPMVPSDAETETVVINKPDPPSGPQETPDG
PQRERRFTAPGFDAKETTIIATTPEPATEAFVPPGQDNTTQFGVPPKAAVPQSIPPRLGGKLRTSRQINWGWILALVVIV
LALAAIAILGTVLLTRGRHTNVSQEDQVRHTIGNFDAAIQRGDLTTLRSITCGTTRDGYADYDEHAWAETYRRVSAAKQY
PVIASIDQVVVNGQHAEANVTTFMAYDPQVRSTRSLDLQYRDDQWKICQSASG
>Mature_292_residues
PNPPEPGRGGPPKRPGFDPRASRASDEWTPETGEEPDGGFDSSEDATESVPMVPSDAETETVVINKPDPPSGPQETPDGP
QRERRFTAPGFDAKETTIIATTPEPATEAFVPPGQDNTTQFGVPPKAAVPQSIPPRLGGKLRTSRQINWGWILALVVIVL
ALAAIAILGTVLLTRGRHTNVSQEDQVRHTIGNFDAAIQRGDLTTLRSITCGTTRDGYADYDEHAWAETYRRVSAAKQYP
VIASIDQVVVNGQHAEANVTTFMAYDPQVRSTRSLDLQYRDDQWKICQSASG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31813; Mature: 31682

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNPPEPGRGGPPKRPGFDPRASRASDEWTPETGEEPDGGFDSSEDATESVPMVPSDAET
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
ETVVINKPDPPSGPQETPDGPQRERRFTAPGFDAKETTIIATTPEPATEAFVPPGQDNTT
CEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCE
QFGVPPKAAVPQSIPPRLGGKLRTSRQINWGWILALVVIVLALAAIAILGTVLLTRGRHT
ECCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NVSQEDQVRHTIGNFDAAIQRGDLTTLRSITCGTTRDGYADYDEHAWAETYRRVSAAKQY
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PVIASIDQVVVNGQHAEANVTTFMAYDPQVRSTRSLDLQYRDDQWKICQSASG
CHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHCCCC
>Mature Secondary Structure 
PNPPEPGRGGPPKRPGFDPRASRASDEWTPETGEEPDGGFDSSEDATESVPMVPSDAET
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
ETVVINKPDPPSGPQETPDGPQRERRFTAPGFDAKETTIIATTPEPATEAFVPPGQDNTT
CEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCE
QFGVPPKAAVPQSIPPRLGGKLRTSRQINWGWILALVVIVLALAAIAILGTVLLTRGRHT
ECCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
NVSQEDQVRHTIGNFDAAIQRGDLTTLRSITCGTTRDGYADYDEHAWAETYRRVSAAKQY
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PVIASIDQVVVNGQHAEANVTTFMAYDPQVRSTRSLDLQYRDDQWKICQSASG
CHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA