Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409931

Identifier: 41409931

GI number: 41409931

Start: 4287178

End: 4287960

Strand: Reverse

Name: 41409931

Synonym: MAP3833c

Alternate gene names: NA

Gene position: 4287960-4287178 (Counterclockwise)

Preceding gene: 41409933

Following gene: 41409930

Centisome position: 88.78

GC content: 68.33

Gene sequence:

>783_bases
GTGCCCGTCGCAGACTTGGTGAAGTCATCAAGCGACGAAGCCAGTTATATTGTACCAGAACGAGATTCGACGCACGAACC
GCCGGACGGGTGTGTCGGGCGCCACAGTCGCAGACGTGAGCCGACCCGATACACGGGTCAGGATCGACGGTGTGCGGTGC
GCGTCCCGACGCCCCGGTTACCGATCGGCATCAGCGGATTGGCAGGTGCGGTCAGTACCATCGGTGCCGTGGCATCCAAC
GGCCCACGCGACGAGTTCCACAACCAGCTCACGCAGCATGCCGACTTCGGCATGAGCCAGCAGCCGCCCACCGGCGAGCT
GCCGCCGCCCGGCTTCCCGCCGGACCGGCCCGAGGGGTTCGAGCAACCCGGCAACGTCGACCCGTTCGACCAGCAGGCTG
AGCCCACCCCCTGGTATCGCCGGCCCGCGATGCTGATCGCCTGGGTGGTCTCCGTCGTCGTCCTGATCGGCCTGATCGTC
TTCGGCGTCATCGAGCTCATCGGCGGCCAACAGGGCGTCAGCCATGTGCCCAAATCGACCACCAGCACGACCACCACGAC
CACCACGACCACGACACCGACGACGACAACCACCACCACCACGCCGAGCTCGACCTCGCCCGGCAGCAGCGCCGAACAGC
CGCCGGCGCAGCAGCCCAGCCAGCAGCCCGGCGGGGGCCAGACCCAGCAGCCGTCGCATCACCACCGGCTGCCGCAGCTG
CCGCCGGTGATCACCATTCCGCAGGTGCCGACCGTCATCACGGTGCCGCCGGGTCTGCGTTAG

Upstream 100 bases:

>100_bases
GGCGCTACCGGGAGGCGGTTGTGTAGTGGTCGCGGGCGCGGTCAAGGTGCTCGCATGACCAGCGGTTCCGGTCGGCTCGC
TGCGCATTGACGCGGAAAGC

Downstream 100 bases:

>100_bases
GCCGCGGGGCGGCGCCCTACACTCGCTGCAATCCAACCGACGACTGACACAGGGGTGCGGGACATGAGCGAGCCGCTCGG
ACTGTCGATCGGAGTGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MPVADLVKSSSDEASYIVPERDSTHEPPDGCVGRHSRRREPTRYTGQDRRCAVRVPTPRLPIGISGLAGAVSTIGAVASN
GPRDEFHNQLTQHADFGMSQQPPTGELPPPGFPPDRPEGFEQPGNVDPFDQQAEPTPWYRRPAMLIAWVVSVVVLIGLIV
FGVIELIGGQQGVSHVPKSTTSTTTTTTTTTTPTTTTTTTTPSSTSPGSSAEQPPAQQPSQQPGGGQTQQPSHHHRLPQL
PPVITIPQVPTVITVPPGLR

Sequences:

>Translated_260_residues
MPVADLVKSSSDEASYIVPERDSTHEPPDGCVGRHSRRREPTRYTGQDRRCAVRVPTPRLPIGISGLAGAVSTIGAVASN
GPRDEFHNQLTQHADFGMSQQPPTGELPPPGFPPDRPEGFEQPGNVDPFDQQAEPTPWYRRPAMLIAWVVSVVVLIGLIV
FGVIELIGGQQGVSHVPKSTTSTTTTTTTTTTPTTTTTTTTPSSTSPGSSAEQPPAQQPSQQPGGGQTQQPSHHHRLPQL
PPVITIPQVPTVITVPPGLR
>Mature_259_residues
PVADLVKSSSDEASYIVPERDSTHEPPDGCVGRHSRRREPTRYTGQDRRCAVRVPTPRLPIGISGLAGAVSTIGAVASNG
PRDEFHNQLTQHADFGMSQQPPTGELPPPGFPPDRPEGFEQPGNVDPFDQQAEPTPWYRRPAMLIAWVVSVVVLIGLIVF
GVIELIGGQQGVSHVPKSTTSTTTTTTTTTTPTTTTTTTTPSSTSPGSSAEQPPAQQPSQQPGGGQTQQPSHHHRLPQLP
PVITIPQVPTVITVPPGLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27680; Mature: 27549

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVADLVKSSSDEASYIVPERDSTHEPPDGCVGRHSRRREPTRYTGQDRRCAVRVPTPRL
CCHHHHHHCCCCCCEEECCCCCCCCCCCCCHHCCCHHCCCCCCCCCCCCEEEEECCCCCC
PIGISGLAGAVSTIGAVASNGPRDEFHNQLTQHADFGMSQQPPTGELPPPGFPPDRPEGF
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
EQPGNVDPFDQQAEPTPWYRRPAMLIAWVVSVVVLIGLIVFGVIELIGGQQGVSHVPKST
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
TSTTTTTTTTTTPTTTTTTTTPSSTSPGSSAEQPPAQQPSQQPGGGQTQQPSHHHRLPQL
CCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
PPVITIPQVPTVITVPPGLR
CCEEECCCCCEEEECCCCCC
>Mature Secondary Structure 
PVADLVKSSSDEASYIVPERDSTHEPPDGCVGRHSRRREPTRYTGQDRRCAVRVPTPRL
CHHHHHHCCCCCCEEECCCCCCCCCCCCCHHCCCHHCCCCCCCCCCCCEEEEECCCCCC
PIGISGLAGAVSTIGAVASNGPRDEFHNQLTQHADFGMSQQPPTGELPPPGFPPDRPEGF
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
EQPGNVDPFDQQAEPTPWYRRPAMLIAWVVSVVVLIGLIVFGVIELIGGQQGVSHVPKST
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
TSTTTTTTTTTTPTTTTTTTTPSSTSPGSSAEQPPAQQPSQQPGGGQTQQPSHHHRLPQL
CCCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
PPVITIPQVPTVITVPPGLR
CCEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA