Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409900

Identifier: 41409900

GI number: 41409900

Start: 4249378

End: 4250040

Strand: Reverse

Name: 41409900

Synonym: MAP3802c

Alternate gene names: NA

Gene position: 4250040-4249378 (Counterclockwise)

Preceding gene: 41409903

Following gene: 41409896

Centisome position: 88.0

GC content: 71.95

Gene sequence:

>663_bases
ATGGCAGCAAACGACGACCCGGAGGAGCGGATCCGGGAACTCGAGCGTCCGCTCGCCGACTCGGCGCGGGCCTCCGAGCA
GGGCAGCGCGCCGCCCACCGGCCCGGGCTACCCTCCTGCGCCGGCGCCGTGGTCCTACGGCGGGCCCGTCCCCGGCCCGC
CCGGGCAACGCCCGTCGGGCAACCGAGTGTGGTGGGTGGTGGGCACCCTCATCGCCGTCGGCGTGCTGGCCCTGACCGGC
GGCATCGCAGCCTTTGCGGCACACCAGCTTTCGGGGGTGAAGTCGATCATCAACTCGCCGCCCACCATCTCCAGGACGTT
CGGCCCGCCGCCGGGCATCTCGACGACGCCGGCCCCCTCGACGTCCCGCCGGACGCCGACGTCACCGGCCGCGCCGCCGG
GCACCGAGCTCAGCGTCGCCGGGATCAACGAGAACCGCACGCTGGCCTGTGACGACAACCCGGTCAGCGTCAGCGGCGTG
TCCAACACCGTGGTGATCACCGGGCATTGCACCAGCCTGTCGGTGTCGGGCGTGCAGAACACGGTCACCGTCGAGGCGGT
CGAGCGCATCGACGCCTCGGGCTTCAACAACAAGGTCACCTACCACTCGGGCACACCGAGCATCAGCAACTCGGGTGGCT
CGAACGTGGTCGGCCGGGGCTGA

Upstream 100 bases:

>100_bases
GGCGGCGACGCAGCAGGATCTGGCGGTTCGGCAAATCGGGCACGGTCCTAAAAACTACCGAACGGGCCGAAACCGCAGAA
GGGAATGGCATATTCAATCC

Downstream 100 bases:

>100_bases
CGGTCAGCCGGGCTGTTCGGGATCGTCGTCGAGGACGCTGACCGCGATGCCGTACGGCAGGAAGCGCACCTTGCGTTTGG
GGTCGACGTTGTCCTTGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MAANDDPEERIRELERPLADSARASEQGSAPPTGPGYPPAPAPWSYGGPVPGPPGQRPSGNRVWWVVGTLIAVGVLALTG
GIAAFAAHQLSGVKSIINSPPTISRTFGPPPGISTTPAPSTSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGV
SNTVVITGHCTSLSVSGVQNTVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG

Sequences:

>Translated_220_residues
MAANDDPEERIRELERPLADSARASEQGSAPPTGPGYPPAPAPWSYGGPVPGPPGQRPSGNRVWWVVGTLIAVGVLALTG
GIAAFAAHQLSGVKSIINSPPTISRTFGPPPGISTTPAPSTSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGV
SNTVVITGHCTSLSVSGVQNTVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG
>Mature_219_residues
AANDDPEERIRELERPLADSARASEQGSAPPTGPGYPPAPAPWSYGGPVPGPPGQRPSGNRVWWVVGTLIAVGVLALTGG
IAAFAAHQLSGVKSIINSPPTISRTFGPPPGISTTPAPSTSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGVS
NTVVITGHCTSLSVSGVQNTVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22250; Mature: 22119

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAANDDPEERIRELERPLADSARASEQGSAPPTGPGYPPAPAPWSYGGPVPGPPGQRPSG
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NRVWWVVGTLIAVGVLALTGGIAAFAAHQLSGVKSIINSPPTISRTFGPPPGISTTPAPS
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGVSNTVVITGHCTSLSVSGVQN
CCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEECCCCEEEEEECCCEEEECCCCC
TVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG
EEHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AANDDPEERIRELERPLADSARASEQGSAPPTGPGYPPAPAPWSYGGPVPGPPGQRPSG
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NRVWWVVGTLIAVGVLALTGGIAAFAAHQLSGVKSIINSPPTISRTFGPPPGISTTPAPS
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
TSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGVSNTVVITGHCTSLSVSGVQN
CCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEECCCCEEEEEECCCEEEECCCCC
TVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG
EEHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA