| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409900
Identifier: 41409900
GI number: 41409900
Start: 4249378
End: 4250040
Strand: Reverse
Name: 41409900
Synonym: MAP3802c
Alternate gene names: NA
Gene position: 4250040-4249378 (Counterclockwise)
Preceding gene: 41409903
Following gene: 41409896
Centisome position: 88.0
GC content: 71.95
Gene sequence:
>663_bases ATGGCAGCAAACGACGACCCGGAGGAGCGGATCCGGGAACTCGAGCGTCCGCTCGCCGACTCGGCGCGGGCCTCCGAGCA GGGCAGCGCGCCGCCCACCGGCCCGGGCTACCCTCCTGCGCCGGCGCCGTGGTCCTACGGCGGGCCCGTCCCCGGCCCGC CCGGGCAACGCCCGTCGGGCAACCGAGTGTGGTGGGTGGTGGGCACCCTCATCGCCGTCGGCGTGCTGGCCCTGACCGGC GGCATCGCAGCCTTTGCGGCACACCAGCTTTCGGGGGTGAAGTCGATCATCAACTCGCCGCCCACCATCTCCAGGACGTT CGGCCCGCCGCCGGGCATCTCGACGACGCCGGCCCCCTCGACGTCCCGCCGGACGCCGACGTCACCGGCCGCGCCGCCGG GCACCGAGCTCAGCGTCGCCGGGATCAACGAGAACCGCACGCTGGCCTGTGACGACAACCCGGTCAGCGTCAGCGGCGTG TCCAACACCGTGGTGATCACCGGGCATTGCACCAGCCTGTCGGTGTCGGGCGTGCAGAACACGGTCACCGTCGAGGCGGT CGAGCGCATCGACGCCTCGGGCTTCAACAACAAGGTCACCTACCACTCGGGCACACCGAGCATCAGCAACTCGGGTGGCT CGAACGTGGTCGGCCGGGGCTGA
Upstream 100 bases:
>100_bases GGCGGCGACGCAGCAGGATCTGGCGGTTCGGCAAATCGGGCACGGTCCTAAAAACTACCGAACGGGCCGAAACCGCAGAA GGGAATGGCATATTCAATCC
Downstream 100 bases:
>100_bases CGGTCAGCCGGGCTGTTCGGGATCGTCGTCGAGGACGCTGACCGCGATGCCGTACGGCAGGAAGCGCACCTTGCGTTTGG GGTCGACGTTGTCCTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MAANDDPEERIRELERPLADSARASEQGSAPPTGPGYPPAPAPWSYGGPVPGPPGQRPSGNRVWWVVGTLIAVGVLALTG GIAAFAAHQLSGVKSIINSPPTISRTFGPPPGISTTPAPSTSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGV SNTVVITGHCTSLSVSGVQNTVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG
Sequences:
>Translated_220_residues MAANDDPEERIRELERPLADSARASEQGSAPPTGPGYPPAPAPWSYGGPVPGPPGQRPSGNRVWWVVGTLIAVGVLALTG GIAAFAAHQLSGVKSIINSPPTISRTFGPPPGISTTPAPSTSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGV SNTVVITGHCTSLSVSGVQNTVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG >Mature_219_residues AANDDPEERIRELERPLADSARASEQGSAPPTGPGYPPAPAPWSYGGPVPGPPGQRPSGNRVWWVVGTLIAVGVLALTGG IAAFAAHQLSGVKSIINSPPTISRTFGPPPGISTTPAPSTSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGVS NTVVITGHCTSLSVSGVQNTVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22250; Mature: 22119
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANDDPEERIRELERPLADSARASEQGSAPPTGPGYPPAPAPWSYGGPVPGPPGQRPSG CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NRVWWVVGTLIAVGVLALTGGIAAFAAHQLSGVKSIINSPPTISRTFGPPPGISTTPAPS CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC TSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGVSNTVVITGHCTSLSVSGVQN CCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEECCCCEEEEEECCCEEEECCCCC TVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG EEHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AANDDPEERIRELERPLADSARASEQGSAPPTGPGYPPAPAPWSYGGPVPGPPGQRPSG CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NRVWWVVGTLIAVGVLALTGGIAAFAAHQLSGVKSIINSPPTISRTFGPPPGISTTPAPS CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC TSRRTPTSPAAPPGTELSVAGINENRTLACDDNPVSVSGVSNTVVITGHCTSLSVSGVQN CCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCEEEECCCCEEEEEECCCEEEECCCCC TVTVEAVERIDASGFNNKVTYHSGTPSISNSGGSNVVGRG EEHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA