Click here to switch to the map view.

The map label for this gene is betI [C]

Identifier: 41409896

GI number: 41409896

Start: 4243383

End: 4244003

Strand: Reverse

Name: betI [C]

Synonym: MAP3798c

Alternate gene names: 41409896

Gene position: 4244003-4243383 (Counterclockwise)

Preceding gene: 41409900

Following gene: 41409895

Centisome position: 87.87

GC content: 70.69

Gene sequence:

>621_bases
ATGTCCATTGCCGCAGGCCAGCAGCCCGGTCGCCCCGCGGGGCCCACCAGGCGAACGACCGCGCCGCGCAAGCGCGGCGA
CGACACGCGGGCCAGGATCATCGACGAGACGGTCCGCTGCATCATCGAGGAGGGGTTCGCCGCCGCCACCGCCAAGCACG
TGGCCGAGCGGGCGGGCGTGACCTGGGGCGTCATCCAGTACCACTTCGGCGACCGCAACGGCCTGCTGATGGCCGCGGTG
GACGACGGGGTGGCCCGGCTGGTGGAAAGCCTGTCGTCGGCCGACGTCAGCGAGTTGCCGCTGCGGCAGCGCGTCGAGGT
CGTCATCGACACCGCGTGGAGCTGCTACAGCAGCCCCACGTCGATGGCGGCGTTCGAGATCCTGCACGCCACCCGGGGCG
CGCTGGGCGACTCGTCGCGCCGCCACCTGCTGGACATGAACGCCGCTATCGGCCAGCTCGGCCGGCTGATCACCACGGAT
CCGGCGAATGCCGGTGTGGCCGAGGTGATTTGGGCGACGCTGCGCGGGGTTGTGCTGGCGCAGATGGTGATCGGGACGAC
CGTCGACTGGAGCCTGGAACGGCGTGCCCTGATCGACATGGTCACCCGTGTGCTGCAATGA

Upstream 100 bases:

>100_bases
AGTTCGGGGACCAGGACGGCCAGCTCGGACCTGGACAGGCGGGCATACGGAGATTGGGCCACGGCCCAAAAATAGACTCG
GCTATGTTATAAAGTCAACA

Downstream 100 bases:

>100_bases
TCCGATGACCCTCGACGACCTGGCCGACATCGAAGCCATCAAGCAAGTCAAATACCGCTATCTGCGCGCGCTGGACACCA
AGCACTGGGACGATTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MSIAAGQQPGRPAGPTRRTTAPRKRGDDTRARIIDETVRCIIEEGFAAATAKHVAERAGVTWGVIQYHFGDRNGLLMAAV
DDGVARLVESLSSADVSELPLRQRVEVVIDTAWSCYSSPTSMAAFEILHATRGALGDSSRRHLLDMNAAIGQLGRLITTD
PANAGVAEVIWATLRGVVLAQMVIGTTVDWSLERRALIDMVTRVLQ

Sequences:

>Translated_206_residues
MSIAAGQQPGRPAGPTRRTTAPRKRGDDTRARIIDETVRCIIEEGFAAATAKHVAERAGVTWGVIQYHFGDRNGLLMAAV
DDGVARLVESLSSADVSELPLRQRVEVVIDTAWSCYSSPTSMAAFEILHATRGALGDSSRRHLLDMNAAIGQLGRLITTD
PANAGVAEVIWATLRGVVLAQMVIGTTVDWSLERRALIDMVTRVLQ
>Mature_205_residues
SIAAGQQPGRPAGPTRRTTAPRKRGDDTRARIIDETVRCIIEEGFAAATAKHVAERAGVTWGVIQYHFGDRNGLLMAAVD
DGVARLVESLSSADVSELPLRQRVEVVIDTAWSCYSSPTSMAAFEILHATRGALGDSSRRHLLDMNAAIGQLGRLITTDP
ANAGVAEVIWATLRGVVLAQMVIGTTVDWSLERRALIDMVTRVLQ

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22217; Mature: 22085

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAAGQQPGRPAGPTRRTTAPRKRGDDTRARIIDETVRCIIEEGFAAATAKHVAERAGV
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC
TWGVIQYHFGDRNGLLMAAVDDGVARLVESLSSADVSELPLRQRVEVVIDTAWSCYSSPT
EEEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCH
SMAAFEILHATRGALGDSSRRHLLDMNAAIGQLGRLITTDPANAGVAEVIWATLRGVVLA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHH
QMVIGTTVDWSLERRALIDMVTRVLQ
HHHHHCCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SIAAGQQPGRPAGPTRRTTAPRKRGDDTRARIIDETVRCIIEEGFAAATAKHVAERAGV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC
TWGVIQYHFGDRNGLLMAAVDDGVARLVESLSSADVSELPLRQRVEVVIDTAWSCYSSPT
EEEEEEEEECCCCCEEEEECCHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHCCCH
SMAAFEILHATRGALGDSSRRHLLDMNAAIGQLGRLITTDPANAGVAEVIWATLRGVVLA
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHH
QMVIGTTVDWSLERRALIDMVTRVLQ
HHHHHCCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA