| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409858
Identifier: 41409858
GI number: 41409858
Start: 4198442
End: 4198828
Strand: Reverse
Name: 41409858
Synonym: MAP3760c
Alternate gene names: NA
Gene position: 4198828-4198442 (Counterclockwise)
Preceding gene: 41409859
Following gene: 41409857
Centisome position: 86.94
GC content: 62.02
Gene sequence:
>387_bases ATGTCCTTGCCGCTCGATGCCGCCGACGAGCGCAATCGGTACTGCATCCAGCTCTACCACCGCACGGCGGCTCAGGCGGA TCTCAGCGGCAGGCGGGTGCTGGAAGTTGGCTGCGGCAACGGCGGCGGGGCCTCATATCTCACGCGCACCATGCGGCCCG CCTCGTACACGGGGGTCGACTTAAATCAGGCCGGTATCGCCTTCTGCCGAAAACGGCACATCGTGCCTGGACTCGATTTT GTGCGAGGTGACGCCCAAAATCTGTCCTTCCCCGACGAGTCGTTCGATGCGGTGCTCAATATCGAATCCTCGGCCAACTA CACTTCCCTGTCAGGGAACGTGCCGGGGCGTGGTGTAAATAGTGGCGGCGTGTCGGTACTGATGTAG
Upstream 100 bases:
>100_bases TATCAGCAGAAGTACCAGAAGTATGGTTACTCGTTGCTCAGTCGTCGACTCAGCCGCGATGACGTTGTCTTCCTCAATTT GATACGAGGAAGACCCGCCG
Downstream 100 bases:
>100_bases AGGGCCATCGCGTGAGTCTCTGTGGTGAAACGACCAAGGATCACTACCGAGAGGAACATCGCGATGGCCCTGGACCAGTC TGCCTTGCTGGAGGTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSLPLDAADERNRYCIQLYHRTAAQADLSGRRVLEVGCGNGGGASYLTRTMRPASYTGVDLNQAGIAFCRKRHIVPGLDF VRGDAQNLSFPDESFDAVLNIESSANYTSLSGNVPGRGVNSGGVSVLM
Sequences:
>Translated_128_residues MSLPLDAADERNRYCIQLYHRTAAQADLSGRRVLEVGCGNGGGASYLTRTMRPASYTGVDLNQAGIAFCRKRHIVPGLDF VRGDAQNLSFPDESFDAVLNIESSANYTSLSGNVPGRGVNSGGVSVLM >Mature_127_residues SLPLDAADERNRYCIQLYHRTAAQADLSGRRVLEVGCGNGGGASYLTRTMRPASYTGVDLNQAGIAFCRKRHIVPGLDFV RGDAQNLSFPDESFDAVLNIESSANYTSLSGNVPGRGVNSGGVSVLM
Specific function: Catalyzes the methylation of the lipid moiety of the intermediate compounds phthiotriol and glycosylated phenolphthiotriol dimycoserosates to form phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. Phthiotriol/phenolphthiotriol dimycocerosates methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 13655; Mature: 13524
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPLDAADERNRYCIQLYHRTAAQADLSGRRVLEVGCGNGGGASYLTRTMRPASYTGVD CCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCC LNQAGIAFCRKRHIVPGLDFVRGDAQNLSFPDESFDAVLNIESSANYTSLSGNVPGRGVN CCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCC SGGVSVLM CCCEEEEC >Mature Secondary Structure SLPLDAADERNRYCIQLYHRTAAQADLSGRRVLEVGCGNGGGASYLTRTMRPASYTGVD CCCCCCCCCCCCEEEEEEHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHCCCCCCCCCC LNQAGIAFCRKRHIVPGLDFVRGDAQNLSFPDESFDAVLNIESSANYTSLSGNVPGRGVN CCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCC SGGVSVLM CCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]