| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409854
Identifier: 41409854
GI number: 41409854
Start: 4194099
End: 4194959
Strand: Reverse
Name: 41409854
Synonym: MAP3756c
Alternate gene names: NA
Gene position: 4194959-4194099 (Counterclockwise)
Preceding gene: 41409855
Following gene: 41409846
Centisome position: 86.86
GC content: 59.23
Gene sequence:
>861_bases ATGATCTCCTCCGTTGGTGTTCAGATCCAGCCGGCCGGGACCCCGAACTACCGGACCTGGCGTGCCGCGGTCATCCAAGC CGAATGTATGGGGGCCGACCTGATCTTTGGATACGACCATTTTCACGAACCGGTTTTTGACAAGGCCACCGATGCCGGCC CCGTGTTGTCCCCACATCAGCCCGAGGTGAACCACTTTGAGGGTTGGAGCGCCCTTGCGTCCTGGGGTGAAATCATCAAC CGAGCCCAGATCGGGTTGCTGGTTACCGGAGTCGGCTACCGCAACCCCGACCTGCTGGCAGACATGGCCCGCACCGTCGA CCACATCAGCAACGGACGACTCATCTTGGGTTTGGGCGCTGGCCGGTACGAAAAGGACTATGCCACCTACGGATACGAAT TCGGTACTGTCGCATCCCGCATGTCGCTCTTCGACGCCAGCCTTGCGCGCATCAAATACCGTCTCGCGCAACTAAAACCG CCACCGCTGCACCCAATACCCATCCTGATCGGCAGCTCGGGTGAAAAGAAAACCCTCCCGAGAGTCGCCCGCCACGCTGA CATCTGGCACACCTTCCTGCCGATCGAACAGTTCCGCATCAAAAGTCAACTGCTGGACGATCTCGCGCAACACAACGGCC GAGACGGCACCGCCATCACCCGAGCGGTGCCCTGGTTCGATGACAAATCCGCCGACGAATATGTAGCCGCAGGGGCCAGG GTCCTCATCGTCCAGATGCGGCCCACAGAACAGGGCTATGACTTCAGCCAACTGATCAAACTACTGACCTGGCCGCGGCA AGCTGTACTCCGCACAAAGTTAACCCAACCAATATCAAGGAAGGCCAAAGCCGATGTCTGA
Upstream 100 bases:
>100_bases CCGGGCACATGGGCTACACGGCAGATACCCAGTCAATCATCCTCGACTGGATCACCCACCGACTGCAACCCTCGCGGGAT CGACAGCCGGGTGGCGGGCA
Downstream 100 bases:
>100_bases CACCAAAACCGTTGCACTGGAATCTTTTCGATTGATTGAAAACGGCGACGTCGAACTGGCGGAGAAAATCATCGCTTCCG ACTTCGTCAATCAAGAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Luciferase Family Protein; Oxidoreductase; MmcI Protein; Monooxygenase; Luciferase-Like Protein; 5 10-Methylenetetrahydromethanopterin Reductase; Luciferase-Like Monooxygenase Superfamily; Fmn-Dependent Monooxygenase; Luciferase; Luciferase-Like Subgroup; Flavin-Dependent Oxidoreductase; Luciferase-Like Oxidoreductase; Sugar Transporter Superfamily Protein
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MISSVGVQIQPAGTPNYRTWRAAVIQAECMGADLIFGYDHFHEPVFDKATDAGPVLSPHQPEVNHFEGWSALASWGEIIN RAQIGLLVTGVGYRNPDLLADMARTVDHISNGRLILGLGAGRYEKDYATYGYEFGTVASRMSLFDASLARIKYRLAQLKP PPLHPIPILIGSSGEKKTLPRVARHADIWHTFLPIEQFRIKSQLLDDLAQHNGRDGTAITRAVPWFDDKSADEYVAAGAR VLIVQMRPTEQGYDFSQLIKLLTWPRQAVLRTKLTQPISRKAKADV
Sequences:
>Translated_286_residues MISSVGVQIQPAGTPNYRTWRAAVIQAECMGADLIFGYDHFHEPVFDKATDAGPVLSPHQPEVNHFEGWSALASWGEIIN RAQIGLLVTGVGYRNPDLLADMARTVDHISNGRLILGLGAGRYEKDYATYGYEFGTVASRMSLFDASLARIKYRLAQLKP PPLHPIPILIGSSGEKKTLPRVARHADIWHTFLPIEQFRIKSQLLDDLAQHNGRDGTAITRAVPWFDDKSADEYVAAGAR VLIVQMRPTEQGYDFSQLIKLLTWPRQAVLRTKLTQPISRKAKADV >Mature_286_residues MISSVGVQIQPAGTPNYRTWRAAVIQAECMGADLIFGYDHFHEPVFDKATDAGPVLSPHQPEVNHFEGWSALASWGEIIN RAQIGLLVTGVGYRNPDLLADMARTVDHISNGRLILGLGAGRYEKDYATYGYEFGTVASRMSLFDASLARIKYRLAQLKP PPLHPIPILIGSSGEKKTLPRVARHADIWHTFLPIEQFRIKSQLLDDLAQHNGRDGTAITRAVPWFDDKSADEYVAAGAR VLIVQMRPTEQGYDFSQLIKLLTWPRQAVLRTKLTQPISRKAKADV
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31827; Mature: 31827
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSVGVQIQPAGTPNYRTWRAAVIQAECMGADLIFGYDHFHEPVFDKATDAGPVLSPHQ CCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECHHHHCCCHHHCCCCCCCCCCCCC PEVNHFEGWSALASWGEIINRAQIGLLVTGVGYRNPDLLADMARTVDHISNGRLILGLGA CCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECC GRYEKDYATYGYEFGTVASRMSLFDASLARIKYRLAQLKPPPLHPIPILIGSSGEKKTLP CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHH RVARHADIWHTFLPIEQFRIKSQLLDDLAQHNGRDGTAITRAVPWFDDKSADEYVAAGAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHCCCE VLIVQMRPTEQGYDFSQLIKLLTWPRQAVLRTKLTQPISRKAKADV EEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MISSVGVQIQPAGTPNYRTWRAAVIQAECMGADLIFGYDHFHEPVFDKATDAGPVLSPHQ CCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEECHHHHCCCHHHCCCCCCCCCCCCC PEVNHFEGWSALASWGEIINRAQIGLLVTGVGYRNPDLLADMARTVDHISNGRLILGLGA CCCCCCCCHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECC GRYEKDYATYGYEFGTVASRMSLFDASLARIKYRLAQLKPPPLHPIPILIGSSGEKKTLP CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHH RVARHADIWHTFLPIEQFRIKSQLLDDLAQHNGRDGTAITRAVPWFDDKSADEYVAAGAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHCCCE VLIVQMRPTEQGYDFSQLIKLLTWPRQAVLRTKLTQPISRKAKADV EEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA