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The map label for this gene is IS1110

Identifier: 41409846

GI number: 41409846

Start: 4183576

End: 4184784

Strand: Reverse

Name: IS1110

Synonym: MAP3748c

Alternate gene names: NA

Gene position: 4184784-4183576 (Counterclockwise)

Preceding gene: 41409854

Following gene: 41409845

Centisome position: 86.65

GC content: 65.01

Gene sequence:

>1209_bases
ATGGCAGCGGGCCGGTTGTGGGCTGGTGTAGATGTCGGCAGGGAATATCACTGGGTGTGCGTGGTCGATGACACCGGTGC
GGTGGTGTTGTCGCGCAAGCTCGTCAACGACGAGCAACCCATCCGTGAACTCGTCGCCGAGATTGACCAACTGGCTGAGG
AGGTGTCCTGGACGGTCGATCTGACCACGGTATATGCGGCGTTGTTGTTGACAGCGTTGGCTGCTGCCGATACGCCGGTG
CGTTACCTGAGCGGTCGGGCGGTGTGGCAGGCCTCGGCGGTCTATCGCGGCGGTGAGGCCAAGACTGACGCCAAAGACGC
CCGGGTGATCGCCGATCAATCCCGGATGCGTGGGGCCGATCTGCCGGTCCTGGCGCCCGACGATGACCTGATCACCGAAC
TGCGGATGCTGACCGCCCATCGCACCGACCTGGTCGCCGACCGCACCCGCACCATCAACCGGCTGCGTCAGCAGTTGGTG
GCAGTATGCCCAGCCTTGGAGCGAGTAGCTGCGCTGACCTCTGATCGCGGCTGGGTGATGTTGCTGTCGCGATATCAGCG
TCCGAAAGCCATACGCAACAGCGGTGTTTCGCGATTGACGAAGATCCTCGGCGACGCCGGGGTGCGCAACGCTGCATCGA
TCGCCGACGCTGCAGTCACTGCCGCCAAGACCCAAACGGTGCGCCTGCCCGGTGAAGAAGTCGCCGCCCACCTGGTGGCC
GAATTGGCACAGGGGGTGATCGCCCTCGATGCCCGCATCACAGCCACCGACGCCGACATCGAGGGCCGATTTCGCCGACA
TCCGCTCGCTGAGGTGATCACTAGCCTGCCCGGCATCGGCTTCCGACTCGGCGCAGAGTTCCTGGCCGCCGTCGGCGACC
CCGCCAGAATCGGGTCGGCCGACCAGCTCGCCGCCTGGGCCGGCCTGGCCCCAGTCCCTAGCGATTCGGGTAAACGCACC
GGACGACTGCACACACCGCAGCGTTACAGTCGTCGCCTGCGCCCAGTGATGTACATGTCCGCGCTGACCGCGATCCGCTG
CGACCCGCAATCTCGGGCCTACTACCAGTCCAAACGAGACGAAGGCAAACAGTCGATCCAAGCAACCATCTGCCCGGCCC
GACGCCGTACCAACGTCCTCTACGCCCTCATCCGCGACAACCGCACCTGGCAACCTGATTCACCCCCGATCACCGAATCC
GCGGCTTGA

Upstream 100 bases:

>100_bases
TGGCCGCTGATTGAGATCTGCGATGTGATCGCTGCTTTAAGGAAATGCTGGCGGGGTTGTCCGTGGGGATCATGTTGGCA
GACAAGCGAAAAGGGGTGCG

Downstream 100 bases:

>100_bases
CTTCTTCATTGAGAGCGCGACGGGAGATCACGGCAAACCCACGCTTATTGAAAACGATTTTCGACAACATTCCGCTGGGA
CTGTACCGTGAAACTCGGCT

Product: IS1110 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MAAGRLWAGVDVGREYHWVCVVDDTGAVVLSRKLVNDEQPIRELVAEIDQLAEEVSWTVDLTTVYAALLLTALAAADTPV
RYLSGRAVWQASAVYRGGEAKTDAKDARVIADQSRMRGADLPVLAPDDDLITELRMLTAHRTDLVADRTRTINRLRQQLV
AVCPALERVAALTSDRGWVMLLSRYQRPKAIRNSGVSRLTKILGDAGVRNAASIADAAVTAAKTQTVRLPGEEVAAHLVA
ELAQGVIALDARITATDADIEGRFRRHPLAEVITSLPGIGFRLGAEFLAAVGDPARIGSADQLAAWAGLAPVPSDSGKRT
GRLHTPQRYSRRLRPVMYMSALTAIRCDPQSRAYYQSKRDEGKQSIQATICPARRRTNVLYALIRDNRTWQPDSPPITES
AA

Sequences:

>Translated_402_residues
MAAGRLWAGVDVGREYHWVCVVDDTGAVVLSRKLVNDEQPIRELVAEIDQLAEEVSWTVDLTTVYAALLLTALAAADTPV
RYLSGRAVWQASAVYRGGEAKTDAKDARVIADQSRMRGADLPVLAPDDDLITELRMLTAHRTDLVADRTRTINRLRQQLV
AVCPALERVAALTSDRGWVMLLSRYQRPKAIRNSGVSRLTKILGDAGVRNAASIADAAVTAAKTQTVRLPGEEVAAHLVA
ELAQGVIALDARITATDADIEGRFRRHPLAEVITSLPGIGFRLGAEFLAAVGDPARIGSADQLAAWAGLAPVPSDSGKRT
GRLHTPQRYSRRLRPVMYMSALTAIRCDPQSRAYYQSKRDEGKQSIQATICPARRRTNVLYALIRDNRTWQPDSPPITES
AA
>Mature_401_residues
AAGRLWAGVDVGREYHWVCVVDDTGAVVLSRKLVNDEQPIRELVAEIDQLAEEVSWTVDLTTVYAALLLTALAAADTPVR
YLSGRAVWQASAVYRGGEAKTDAKDARVIADQSRMRGADLPVLAPDDDLITELRMLTAHRTDLVADRTRTINRLRQQLVA
VCPALERVAALTSDRGWVMLLSRYQRPKAIRNSGVSRLTKILGDAGVRNAASIADAAVTAAKTQTVRLPGEEVAAHLVAE
LAQGVIALDARITATDADIEGRFRRHPLAEVITSLPGIGFRLGAEFLAAVGDPARIGSADQLAAWAGLAPVPSDSGKRTG
RLHTPQRYSRRLRPVMYMSALTAIRCDPQSRAYYQSKRDEGKQSIQATICPARRRTNVLYALIRDNRTWQPDSPPITESA
A

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 43800; Mature: 43669

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAGRLWAGVDVGREYHWVCVVDDTGAVVLSRKLVNDEQPIRELVAEIDQLAEEVSWTVD
CCCCCEEECCCCCCCEEEEEEECCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEH
LTTVYAALLLTALAAADTPVRYLSGRAVWQASAVYRGGEAKTDAKDARVIADQSRMRGAD
HHHHHHHHHHHHHHHCCCCHHHHCCCHHEEHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
LPVLAPDDDLITELRMLTAHRTDLVADRTRTINRLRQQLVAVCPALERVAALTSDRGWVM
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLSRYQRPKAIRNSGVSRLTKILGDAGVRNAASIADAAVTAAKTQTVRLPGEEVAAHLVA
HHHHHCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH
ELAQGVIALDARITATDADIEGRFRRHPLAEVITSLPGIGFRLGAEFLAAVGDPARIGSA
HHHCCCEEECCEEEECCCCCCCHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCH
DQLAAWAGLAPVPSDSGKRTGRLHTPQRYSRRLRPVMYMSALTAIRCDPQSRAYYQSKRD
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EGKQSIQATICPARRRTNVLYALIRDNRTWQPDSPPITESAA
HHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAGRLWAGVDVGREYHWVCVVDDTGAVVLSRKLVNDEQPIRELVAEIDQLAEEVSWTVD
CCCCEEECCCCCCCEEEEEEECCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEH
LTTVYAALLLTALAAADTPVRYLSGRAVWQASAVYRGGEAKTDAKDARVIADQSRMRGAD
HHHHHHHHHHHHHHHCCCCHHHHCCCHHEEHHHHCCCCCCCCCCHHHHHHHHHHHCCCCC
LPVLAPDDDLITELRMLTAHRTDLVADRTRTINRLRQQLVAVCPALERVAALTSDRGWVM
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLSRYQRPKAIRNSGVSRLTKILGDAGVRNAASIADAAVTAAKTQTVRLPGEEVAAHLVA
HHHHHCCCHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHH
ELAQGVIALDARITATDADIEGRFRRHPLAEVITSLPGIGFRLGAEFLAAVGDPARIGSA
HHHCCCEEECCEEEECCCCCCCHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCHHCCCH
DQLAAWAGLAPVPSDSGKRTGRLHTPQRYSRRLRPVMYMSALTAIRCDPQSRAYYQSKRD
HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
EGKQSIQATICPARRRTNVLYALIRDNRTWQPDSPPITESAA
HHHHHHHHHCCCCHHHCCEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1700062 [H]