| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409836
Identifier: 41409836
GI number: 41409836
Start: 4161096
End: 4161830
Strand: Reverse
Name: 41409836
Synonym: MAP3738c
Alternate gene names: NA
Gene position: 4161830-4161096 (Counterclockwise)
Preceding gene: 41409837
Following gene: 41409834
Centisome position: 86.17
GC content: 62.59
Gene sequence:
>735_bases ATGAGCGTGACACCTGGCGCCGATCCGTACGCCCTGTCGGCGGAGTTCTACGAGGTGATGGCGATCCCACATTGGGATAT GAAGCGCCAAGTGCTGGTATCCGCGTTGACCGCACGTGGACCGGTGAAAGATCACGTGCTTGATATCGGGGCAGGTACGG GGCTCTCGACAGTGACCGTTGCTGACACCATCGCAGACGTCCCCATCCACGCGGTCGAGCCGTCAGCGGCGATGCGCGCC GCGCTCGTCTCCAGGATCCTCAGCCGGCCTGATTTGATTGACCGGGTCACCGTGCACCCGGTCAATCTCGAAGAACTCGA CCTTCCCGAGCGTCTTGGGGCCGTGGTGTTGTTTGGCGTCATCGGGTATATGGACAAGCAAGCCCGCCAACACTTTTGGG CAGCGCTACGCCCACGTCTCACCCCCCGCGCACCGGTGATCGTCGAAGTCATGGCCCTCGACCAGCCCATGCCGGTGCCC GAGATGACCATTGCCCAACAGCGCATTGGTGTGCGGCACAATGAAGTTCGCATATCGGGCCAGCCCGCCGGCAGCGACGC GGAACACTGGACGATGCGCTATGTGGTGAGCGAAGGCGACAAGGTCACCAGAGAATTCACCGCCGAACACACGTGGCACA CCGTGGGCCTCGCCGAACTCGCCCACGAGGCCGAAGCACACGACATGACCTTTGAGCAGCTACACCCGATCATCGGTGTG CTGCACCCACGGTGA
Upstream 100 bases:
>100_bases GAATTGCAGGATGCGCCGCCCTGGTCGCGGCGGGGTTGTCGGGCGCGCTCATCACACATCGTCCACGTGTGGCCGCTGAA AGCCCGGAGTCGGTGACCGA
Downstream 100 bases:
>100_bases GCGCGAGACACGATGAGCGCGAGATAATCGAGTTCTGGGCTCGACGCTGACGAGAGGATGCCGACCAGATCTGGACGATT ACTCGGTTCCAGCGTTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase/Methylase; Thiazolinyl Imide Reductase; Methyltransferase Domain Protein
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MSVTPGADPYALSAEFYEVMAIPHWDMKRQVLVSALTARGPVKDHVLDIGAGTGLSTVTVADTIADVPIHAVEPSAAMRA ALVSRILSRPDLIDRVTVHPVNLEELDLPERLGAVVLFGVIGYMDKQARQHFWAALRPRLTPRAPVIVEVMALDQPMPVP EMTIAQQRIGVRHNEVRISGQPAGSDAEHWTMRYVVSEGDKVTREFTAEHTWHTVGLAELAHEAEAHDMTFEQLHPIIGV LHPR
Sequences:
>Translated_244_residues MSVTPGADPYALSAEFYEVMAIPHWDMKRQVLVSALTARGPVKDHVLDIGAGTGLSTVTVADTIADVPIHAVEPSAAMRA ALVSRILSRPDLIDRVTVHPVNLEELDLPERLGAVVLFGVIGYMDKQARQHFWAALRPRLTPRAPVIVEVMALDQPMPVP EMTIAQQRIGVRHNEVRISGQPAGSDAEHWTMRYVVSEGDKVTREFTAEHTWHTVGLAELAHEAEAHDMTFEQLHPIIGV LHPR >Mature_243_residues SVTPGADPYALSAEFYEVMAIPHWDMKRQVLVSALTARGPVKDHVLDIGAGTGLSTVTVADTIADVPIHAVEPSAAMRAA LVSRILSRPDLIDRVTVHPVNLEELDLPERLGAVVLFGVIGYMDKQARQHFWAALRPRLTPRAPVIVEVMALDQPMPVPE MTIAQQRIGVRHNEVRISGQPAGSDAEHWTMRYVVSEGDKVTREFTAEHTWHTVGLAELAHEAEAHDMTFEQLHPIIGVL HPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26908; Mature: 26777
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTPGADPYALSAEFYEVMAIPHWDMKRQVLVSALTARGPVKDHVLDIGAGTGLSTVTV CCCCCCCCCCEEHHHHHHHEECCCCCHHHHHHHHHHHHCCCCHHHEEEECCCCCCCEEEH ADTIADVPIHAVEPSAAMRAALVSRILSRPDLIDRVTVHPVNLEELDLPERLGAVVLFGV HHHHHCCCCEEECCHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHCCCHHHHHHHHHHHH IGYMDKQARQHFWAALRPRLTPRAPVIVEVMALDQPMPVPEMTIAQQRIGVRHNEVRISG HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEC QPAGSDAEHWTMRYVVSEGDKVTREFTAEHTWHTVGLAELAHEAEAHDMTFEQLHPIIGV CCCCCCCHHEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH LHPR CCCC >Mature Secondary Structure SVTPGADPYALSAEFYEVMAIPHWDMKRQVLVSALTARGPVKDHVLDIGAGTGLSTVTV CCCCCCCCCEEHHHHHHHEECCCCCHHHHHHHHHHHHCCCCHHHEEEECCCCCCCEEEH ADTIADVPIHAVEPSAAMRAALVSRILSRPDLIDRVTVHPVNLEELDLPERLGAVVLFGV HHHHHCCCCEEECCHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHCCCHHHHHHHHHHHH IGYMDKQARQHFWAALRPRLTPRAPVIVEVMALDQPMPVPEMTIAQQRIGVRHNEVRISG HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEC QPAGSDAEHWTMRYVVSEGDKVTREFTAEHTWHTVGLAELAHEAEAHDMTFEQLHPIIGV CCCCCCCHHEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH LHPR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA