Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41409836

Identifier: 41409836

GI number: 41409836

Start: 4161096

End: 4161830

Strand: Reverse

Name: 41409836

Synonym: MAP3738c

Alternate gene names: NA

Gene position: 4161830-4161096 (Counterclockwise)

Preceding gene: 41409837

Following gene: 41409834

Centisome position: 86.17

GC content: 62.59

Gene sequence:

>735_bases
ATGAGCGTGACACCTGGCGCCGATCCGTACGCCCTGTCGGCGGAGTTCTACGAGGTGATGGCGATCCCACATTGGGATAT
GAAGCGCCAAGTGCTGGTATCCGCGTTGACCGCACGTGGACCGGTGAAAGATCACGTGCTTGATATCGGGGCAGGTACGG
GGCTCTCGACAGTGACCGTTGCTGACACCATCGCAGACGTCCCCATCCACGCGGTCGAGCCGTCAGCGGCGATGCGCGCC
GCGCTCGTCTCCAGGATCCTCAGCCGGCCTGATTTGATTGACCGGGTCACCGTGCACCCGGTCAATCTCGAAGAACTCGA
CCTTCCCGAGCGTCTTGGGGCCGTGGTGTTGTTTGGCGTCATCGGGTATATGGACAAGCAAGCCCGCCAACACTTTTGGG
CAGCGCTACGCCCACGTCTCACCCCCCGCGCACCGGTGATCGTCGAAGTCATGGCCCTCGACCAGCCCATGCCGGTGCCC
GAGATGACCATTGCCCAACAGCGCATTGGTGTGCGGCACAATGAAGTTCGCATATCGGGCCAGCCCGCCGGCAGCGACGC
GGAACACTGGACGATGCGCTATGTGGTGAGCGAAGGCGACAAGGTCACCAGAGAATTCACCGCCGAACACACGTGGCACA
CCGTGGGCCTCGCCGAACTCGCCCACGAGGCCGAAGCACACGACATGACCTTTGAGCAGCTACACCCGATCATCGGTGTG
CTGCACCCACGGTGA

Upstream 100 bases:

>100_bases
GAATTGCAGGATGCGCCGCCCTGGTCGCGGCGGGGTTGTCGGGCGCGCTCATCACACATCGTCCACGTGTGGCCGCTGAA
AGCCCGGAGTCGGTGACCGA

Downstream 100 bases:

>100_bases
GCGCGAGACACGATGAGCGCGAGATAATCGAGTTCTGGGCTCGACGCTGACGAGAGGATGCCGACCAGATCTGGACGATT
ACTCGGTTCCAGCGTTGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Oxidoreductase/Methylase; Thiazolinyl Imide Reductase; Methyltransferase Domain Protein

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSVTPGADPYALSAEFYEVMAIPHWDMKRQVLVSALTARGPVKDHVLDIGAGTGLSTVTVADTIADVPIHAVEPSAAMRA
ALVSRILSRPDLIDRVTVHPVNLEELDLPERLGAVVLFGVIGYMDKQARQHFWAALRPRLTPRAPVIVEVMALDQPMPVP
EMTIAQQRIGVRHNEVRISGQPAGSDAEHWTMRYVVSEGDKVTREFTAEHTWHTVGLAELAHEAEAHDMTFEQLHPIIGV
LHPR

Sequences:

>Translated_244_residues
MSVTPGADPYALSAEFYEVMAIPHWDMKRQVLVSALTARGPVKDHVLDIGAGTGLSTVTVADTIADVPIHAVEPSAAMRA
ALVSRILSRPDLIDRVTVHPVNLEELDLPERLGAVVLFGVIGYMDKQARQHFWAALRPRLTPRAPVIVEVMALDQPMPVP
EMTIAQQRIGVRHNEVRISGQPAGSDAEHWTMRYVVSEGDKVTREFTAEHTWHTVGLAELAHEAEAHDMTFEQLHPIIGV
LHPR
>Mature_243_residues
SVTPGADPYALSAEFYEVMAIPHWDMKRQVLVSALTARGPVKDHVLDIGAGTGLSTVTVADTIADVPIHAVEPSAAMRAA
LVSRILSRPDLIDRVTVHPVNLEELDLPERLGAVVLFGVIGYMDKQARQHFWAALRPRLTPRAPVIVEVMALDQPMPVPE
MTIAQQRIGVRHNEVRISGQPAGSDAEHWTMRYVVSEGDKVTREFTAEHTWHTVGLAELAHEAEAHDMTFEQLHPIIGVL
HPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26908; Mature: 26777

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTPGADPYALSAEFYEVMAIPHWDMKRQVLVSALTARGPVKDHVLDIGAGTGLSTVTV
CCCCCCCCCCEEHHHHHHHEECCCCCHHHHHHHHHHHHCCCCHHHEEEECCCCCCCEEEH
ADTIADVPIHAVEPSAAMRAALVSRILSRPDLIDRVTVHPVNLEELDLPERLGAVVLFGV
HHHHHCCCCEEECCHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHCCCHHHHHHHHHHHH
IGYMDKQARQHFWAALRPRLTPRAPVIVEVMALDQPMPVPEMTIAQQRIGVRHNEVRISG
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEC
QPAGSDAEHWTMRYVVSEGDKVTREFTAEHTWHTVGLAELAHEAEAHDMTFEQLHPIIGV
CCCCCCCHHEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LHPR
CCCC
>Mature Secondary Structure 
SVTPGADPYALSAEFYEVMAIPHWDMKRQVLVSALTARGPVKDHVLDIGAGTGLSTVTV
CCCCCCCCCEEHHHHHHHEECCCCCHHHHHHHHHHHHCCCCHHHEEEECCCCCCCEEEH
ADTIADVPIHAVEPSAAMRAALVSRILSRPDLIDRVTVHPVNLEELDLPERLGAVVLFGV
HHHHHCCCCEEECCHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHCCCHHHHHHHHHHHH
IGYMDKQARQHFWAALRPRLTPRAPVIVEVMALDQPMPVPEMTIAQQRIGVRHNEVRISG
HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEC
QPAGSDAEHWTMRYVVSEGDKVTREFTAEHTWHTVGLAELAHEAEAHDMTFEQLHPIIGV
CCCCCCCHHEEEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LHPR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA