| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409834
Identifier: 41409834
GI number: 41409834
Start: 4158368
End: 4159327
Strand: Reverse
Name: 41409834
Synonym: MAP3736c
Alternate gene names: NA
Gene position: 4159327-4158368 (Counterclockwise)
Preceding gene: 41409836
Following gene: 41409833
Centisome position: 86.12
GC content: 60.62
Gene sequence:
>960_bases ATGAAAATCATTTTCATTACGGACGGGGACCCTACGGCACTGAGACCTTTAATGAAAGTCATTTTCAATAACCCAGATGT GACGGAGGTCACACTGGTCGCGGGGTGCGCGCCGTGGCGCTCGGCGTCCGATGCGCGCTTGACCGCTGATCGAATGCCCT GCCCGAGGTTTGGCCGCGGGGGCTGCGATGCCTTGCGGTCGTGGCAATGCTCGGGATTCCACAGCCTTCACGCCGGTACC CCTTATGCGCGCGCGCCGCCAGAGCGCCCGGAGGCGAATTCCGCTGCGCGCCGGAGTTTTCAGCTCTCTGGGCGCAGGCA CAGCCATCGGATTAATCGGCGTTCGCCGCGCGGGCTCGCCCTACTGAGCGTGTCGGAAGGGACGGCTCCCTACCCACTGA TCCATCCCTTGCGTGGAGGTATGTTATCGATAACGATTTTCATTATCGGTTCACGATGGCTCGGTTTGAGCGCGGAAGGA TTGAGCATGGACCCGAATACGCCATCACAAGTTGGGCCGCAATCCCCGGTTTTCGGCGCTGCCCGCGCCACGCTCATTGG ATGCGCGCTGTTGACCGCACTCAGCGCCCTTGCCGGGATGGCACCGCTGATCGCGGTGGTGGAGGTCAGCCGACGGCTAC TAGCTGGTGACACTGCTGTTTGGGCGATCATTGCAGCGGCGCTCGTTGCGCTCGCCGTCAAGCAGCTTGGTACGTTTTGC GCTGGCGTTCTGACCCACCTGGCTGACATCCAGGTCTCGTTTCGAATTCGACGAGATTTGCTCGTGAAGCTGAGCAAACT GCCACTCGGCTGGTTTACCGACCGCAACTCCGGGATTGTCAAGAAGACCGTTGAAGACGACGTCAGCGGCCCTGCACCAG CTGATCGCCCATTCCATCGTGGAACTCACCGCGGCGACAGTTCCCCCATTAGTCGCCTTGACCTACCTGTTTGCTGTTGA
Upstream 100 bases:
>100_bases AGCGGCGACGCCATCGCGCGCGGTTGGCGCTGAACTTGTGAGATTCGACGTGATATGGGCACGGGCTGATCCCCTTTCAT CACATGCAAACACCCCCGTA
Downstream 100 bases:
>100_bases CTGGCGCATGGCGCTCGTCACTTTGCTCCCGGTACTGATTGGGCTGGTCATGTATCAGCGCGCGATGGCCAGCGCGGACA CCAAGTATCCAGAGTTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKIIFITDGDPTALRPLMKVIFNNPDVTEVTLVAGCAPWRSASDARLTADRMPCPRFGRGGCDALRSWQCSGFHSLHAGT PYARAPPERPEANSAARRSFQLSGRRHSHRINRRSPRGLALLSVSEGTAPYPLIHPLRGGMLSITIFIIGSRWLGLSAEG LSMDPNTPSQVGPQSPVFGAARATLIGCALLTALSALAGMAPLIAVVEVSRRLLAGDTAVWAIIAAALVALAVKQLGTFC AGVLTHLADIQVSFRIRRDLLVKLSKLPLGWFTDRNSGIVKKTVEDDVSGPAPADRPFHRGTHRGDSSPISRLDLPVCC
Sequences:
>Translated_319_residues MKIIFITDGDPTALRPLMKVIFNNPDVTEVTLVAGCAPWRSASDARLTADRMPCPRFGRGGCDALRSWQCSGFHSLHAGT PYARAPPERPEANSAARRSFQLSGRRHSHRINRRSPRGLALLSVSEGTAPYPLIHPLRGGMLSITIFIIGSRWLGLSAEG LSMDPNTPSQVGPQSPVFGAARATLIGCALLTALSALAGMAPLIAVVEVSRRLLAGDTAVWAIIAAALVALAVKQLGTFC AGVLTHLADIQVSFRIRRDLLVKLSKLPLGWFTDRNSGIVKKTVEDDVSGPAPADRPFHRGTHRGDSSPISRLDLPVCC >Mature_319_residues MKIIFITDGDPTALRPLMKVIFNNPDVTEVTLVAGCAPWRSASDARLTADRMPCPRFGRGGCDALRSWQCSGFHSLHAGT PYARAPPERPEANSAARRSFQLSGRRHSHRINRRSPRGLALLSVSEGTAPYPLIHPLRGGMLSITIFIIGSRWLGLSAEG LSMDPNTPSQVGPQSPVFGAARATLIGCALLTALSALAGMAPLIAVVEVSRRLLAGDTAVWAIIAAALVALAVKQLGTFC AGVLTHLADIQVSFRIRRDLLVKLSKLPLGWFTDRNSGIVKKTVEDDVSGPAPADRPFHRGTHRGDSSPISRLDLPVCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34147; Mature: 34147
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIFITDGDPTALRPLMKVIFNNPDVTEVTLVAGCAPWRSASDARLTADRMPCPRFGRG CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCC GCDALRSWQCSGFHSLHAGTPYARAPPERPEANSAARRSFQLSGRRHSHRINRRSPRGLA CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCEE LLSVSEGTAPYPLIHPLRGGMLSITIFIIGSRWLGLSAEGLSMDPNTPSQVGPQSPVFGA EEEECCCCCCCCHHHHCCCCEEEEEEEEEECHHCCCCCCCCCCCCCCCHHCCCCCCCHHH ARATLIGCALLTALSALAGMAPLIAVVEVSRRLLAGDTAVWAIIAAALVALAVKQLGTFC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AGVLTHLADIQVSFRIRRDLLVKLSKLPLGWFTDRNSGIVKKTVEDDVSGPAPADRPFHR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEHHHHHCCCCCCCCCCCCCC GTHRGDSSPISRLDLPVCC CCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MKIIFITDGDPTALRPLMKVIFNNPDVTEVTLVAGCAPWRSASDARLTADRMPCPRFGRG CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCCCCC GCDALRSWQCSGFHSLHAGTPYARAPPERPEANSAARRSFQLSGRRHSHRINRRSPRGLA CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCCCCEE LLSVSEGTAPYPLIHPLRGGMLSITIFIIGSRWLGLSAEGLSMDPNTPSQVGPQSPVFGA EEEECCCCCCCCHHHHCCCCEEEEEEEEEECHHCCCCCCCCCCCCCCCHHCCCCCCCHHH ARATLIGCALLTALSALAGMAPLIAVVEVSRRLLAGDTAVWAIIAAALVALAVKQLGTFC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AGVLTHLADIQVSFRIRRDLLVKLSKLPLGWFTDRNSGIVKKTVEDDVSGPAPADRPFHR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEHHHHHCCCCCCCCCCCCCC GTHRGDSSPISRLDLPVCC CCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA