| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409831
Identifier: 41409831
GI number: 41409831
Start: 4154670
End: 4155296
Strand: Reverse
Name: 41409831
Synonym: MAP3733c
Alternate gene names: NA
Gene position: 4155296-4154670 (Counterclockwise)
Preceding gene: 41409832
Following gene: 41409830
Centisome position: 86.03
GC content: 61.08
Gene sequence:
>627_bases ATGACGGCCACTAGCTCGACGACCCAGTCCAGTCGCCGCATCGACGTCCGGATGAGCGCCAGGGATCTCATCAACATCGG GGTCTTCGGCGCTCTCTACATCGCCACTGTGTTCGCGATCAACGTGTTCGCTTTCATCAATCCGCTCGTCATGTTGGTCG CCCTGGCGGTCAGCATGATCGCCGGCGGCGTGCCGTTCATGTTGTTCCTCACCCGGGTGCGACATGCGGGCATGGTGACG GTGTTTGCGATTATCACGGCCGGACTGCTCGCACTGACCGGGCACCCCCCGATCTGCTTCGTGATCACAGTTGCGTGCGC GTTGGTGGCCGAAGTCGTCCTGTGGCTGGGACGCTATCGCTCCCGCACCATGGGTGTACTGGCGTACGCAATCTACGCGG CGTGGTACATCGGGCCGCTGCTGCCCATCTTCTACGCTCGCGATGAATATTTCTCCAGTCCCGGCATGGCACAGATGGGT CCGCGCTACCTCGAAGAGATGGAACGGTTGTTGTCGCCAGCCGTGCTAATCGCATTCGACCTGTCCACGGTGGTATTCGG GCTGATCGGCGGACTGCTCGGAGTAAGGTTGCTGCGCAAGCATTTTCAGAGGGCCGGCCTAGCTTGA
Upstream 100 bases:
>100_bases CGGGCGGCACCTACGCCCGCTTCTGGGAAGAACGAACTCGCGCGCGAGGGTGGCAACTGCGCCAAATTGCGCCCACTCCT GAACTGCAGGCACCTCGACC
Downstream 100 bases:
>100_bases CGCGGACAACGACTCGGGTGACCCAACTCGACCCTCGAACCAAAACCGTGCTGGTGCTGGCCTCAAGCATCGCCGTGATG GCCCCCGGTGGCGAGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTATSSTTQSSRRIDVRMSARDLINIGVFGALYIATVFAINVFAFINPLVMLVALAVSMIAGGVPFMLFLTRVRHAGMVT VFAIITAGLLALTGHPPICFVITVACALVAEVVLWLGRYRSRTMGVLAYAIYAAWYIGPLLPIFYARDEYFSSPGMAQMG PRYLEEMERLLSPAVLIAFDLSTVVFGLIGGLLGVRLLRKHFQRAGLA
Sequences:
>Translated_208_residues MTATSSTTQSSRRIDVRMSARDLINIGVFGALYIATVFAINVFAFINPLVMLVALAVSMIAGGVPFMLFLTRVRHAGMVT VFAIITAGLLALTGHPPICFVITVACALVAEVVLWLGRYRSRTMGVLAYAIYAAWYIGPLLPIFYARDEYFSSPGMAQMG PRYLEEMERLLSPAVLIAFDLSTVVFGLIGGLLGVRLLRKHFQRAGLA >Mature_207_residues TATSSTTQSSRRIDVRMSARDLINIGVFGALYIATVFAINVFAFINPLVMLVALAVSMIAGGVPFMLFLTRVRHAGMVTV FAIITAGLLALTGHPPICFVITVACALVAEVVLWLGRYRSRTMGVLAYAIYAAWYIGPLLPIFYARDEYFSSPGMAQMGP RYLEEMERLLSPAVLIAFDLSTVVFGLIGGLLGVRLLRKHFQRAGLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22654; Mature: 22522
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATSSTTQSSRRIDVRMSARDLINIGVFGALYIATVFAINVFAFINPLVMLVALAVSMI CCCCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGVPFMLFLTRVRHAGMVTVFAIITAGLLALTGHPPICFVITVACALVAEVVLWLGRYR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH SRTMGVLAYAIYAAWYIGPLLPIFYARDEYFSSPGMAQMGPRYLEEMERLLSPAVLIAFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCHHHHHHHH LSTVVFGLIGGLLGVRLLRKHFQRAGLA HHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TATSSTTQSSRRIDVRMSARDLINIGVFGALYIATVFAINVFAFINPLVMLVALAVSMI CCCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGGVPFMLFLTRVRHAGMVTVFAIITAGLLALTGHPPICFVITVACALVAEVVLWLGRYR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH SRTMGVLAYAIYAAWYIGPLLPIFYARDEYFSSPGMAQMGPRYLEEMERLLSPAVLIAFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCHHHHHHHH LSTVVFGLIGGLLGVRLLRKHFQRAGLA HHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA