| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409830
Identifier: 41409830
GI number: 41409830
Start: 4153960
End: 4154673
Strand: Reverse
Name: 41409830
Synonym: MAP3732c
Alternate gene names: NA
Gene position: 4154673-4153960 (Counterclockwise)
Preceding gene: 41409831
Following gene: 41409829
Centisome position: 86.02
GC content: 62.04
Gene sequence:
>714_bases TTGACGCGGACAACGACTCGGGTGACCCAACTCGACCCTCGAACCAAAACCGTGCTGGTGCTGGCCTCAAGCATCGCCGT GATGGCCCCCGGTGGCGAGGTGTTCGTCCCAGCCGCCGTCATCGTTGGGATGCTGCTGGCGGTTGCCGAGCAGGCGTGGG TGCGGGCTGCCATTCTTCCCTCGGCTGCCGGGGCCACGGCCGCAGTCGCTTACCTACTACCACAAGCTATTCCACATCCG ATAATCGGCGCAATCGGTACCGTAGCCGCCTACCTGCTACGGCTCATCGCCGTCGGCGCAATCGTCATTCATCTGGTGAA CACCACGACACCGAGCGAATTCACCGCTGCCCTGCGCGCTACCCACATTCCCCGTGCGATCACGGTCTCCGGTTCCGTCA TGCTGCGATTCCTGCCAACCATCGTTGGTGAAGCACGTGCCGTCAGCGACGCCATGCGATTGCGTGGGATCGGCGGGACA TACGGAATGCTGCGCCATCCCGTTTGCACCATCGAGTACTTCACCGTTCCCCTTATAGCGTCGAGCCTTCGTGTCGCAGA AGATCTTTCAGCAACCGCGCTACTGCGTGGTCTTGGCTCTGCAGCACGGCCGACAACGATGTACCCCCCGCGTTTCGGTA AAGCGGATGCGCTAATCGGTTGCATCGTCAGCGCACTGACCGTCACCACCGTGCTGTGGCCGGTGAAACCGTGA
Upstream 100 bases:
>100_bases TGCTAATCGCATTCGACCTGTCCACGGTGGTATTCGGGCTGATCGGCGGACTGCTCGGAGTAAGGTTGCTGCGCAAGCAT TTTCAGAGGGCCGGCCTAGC
Downstream 100 bases:
>100_bases TTCGCATCGACGGCGTACGTTGGCAATACGCCGGAACCGACGCTGCCGTTTTGGACGGAGTGGACTTGCACATACGCCGT GGCGAGACCGTTCTGCTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTRTTTRVTQLDPRTKTVLVLASSIAVMAPGGEVFVPAAVIVGMLLAVAEQAWVRAAILPSAAGATAAVAYLLPQAIPHP IIGAIGTVAAYLLRLIAVGAIVIHLVNTTTPSEFTAALRATHIPRAITVSGSVMLRFLPTIVGEARAVSDAMRLRGIGGT YGMLRHPVCTIEYFTVPLIASSLRVAEDLSATALLRGLGSAARPTTMYPPRFGKADALIGCIVSALTVTTVLWPVKP
Sequences:
>Translated_237_residues MTRTTTRVTQLDPRTKTVLVLASSIAVMAPGGEVFVPAAVIVGMLLAVAEQAWVRAAILPSAAGATAAVAYLLPQAIPHP IIGAIGTVAAYLLRLIAVGAIVIHLVNTTTPSEFTAALRATHIPRAITVSGSVMLRFLPTIVGEARAVSDAMRLRGIGGT YGMLRHPVCTIEYFTVPLIASSLRVAEDLSATALLRGLGSAARPTTMYPPRFGKADALIGCIVSALTVTTVLWPVKP >Mature_236_residues TRTTTRVTQLDPRTKTVLVLASSIAVMAPGGEVFVPAAVIVGMLLAVAEQAWVRAAILPSAAGATAAVAYLLPQAIPHPI IGAIGTVAAYLLRLIAVGAIVIHLVNTTTPSEFTAALRATHIPRAITVSGSVMLRFLPTIVGEARAVSDAMRLRGIGGTY GMLRHPVCTIEYFTVPLIASSLRVAEDLSATALLRGLGSAARPTTMYPPRFGKADALIGCIVSALTVTTVLWPVKP
Specific function: Unknown
COG id: COG0619
COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24684; Mature: 24552
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTTTRVTQLDPRTKTVLVLASSIAVMAPGGEVFVPAAVIVGMLLAVAEQAWVRAAILP CCCCCCHHEECCCCHHEEEEEECCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCC SAAGATAAVAYLLPQAIPHPIIGAIGTVAAYLLRLIAVGAIVIHLVNTTTPSEFTAALRA CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH THIPRAITVSGSVMLRFLPTIVGEARAVSDAMRLRGIGGTYGMLRHPVCTIEYFTVPLIA HCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEHHHHHHHHH SSLRVAEDLSATALLRGLGSAARPTTMYPPRFGKADALIGCIVSALTVTTVLWPVKP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TRTTTRVTQLDPRTKTVLVLASSIAVMAPGGEVFVPAAVIVGMLLAVAEQAWVRAAILP CCCCCHHEECCCCHHEEEEEECCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCC SAAGATAAVAYLLPQAIPHPIIGAIGTVAAYLLRLIAVGAIVIHLVNTTTPSEFTAALRA CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH THIPRAITVSGSVMLRFLPTIVGEARAVSDAMRLRGIGGTYGMLRHPVCTIEYFTVPLIA HCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEHHHHHHHHH SSLRVAEDLSATALLRGLGSAARPTTMYPPRFGKADALIGCIVSALTVTTVLWPVKP HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA