Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409830

Identifier: 41409830

GI number: 41409830

Start: 4153960

End: 4154673

Strand: Reverse

Name: 41409830

Synonym: MAP3732c

Alternate gene names: NA

Gene position: 4154673-4153960 (Counterclockwise)

Preceding gene: 41409831

Following gene: 41409829

Centisome position: 86.02

GC content: 62.04

Gene sequence:

>714_bases
TTGACGCGGACAACGACTCGGGTGACCCAACTCGACCCTCGAACCAAAACCGTGCTGGTGCTGGCCTCAAGCATCGCCGT
GATGGCCCCCGGTGGCGAGGTGTTCGTCCCAGCCGCCGTCATCGTTGGGATGCTGCTGGCGGTTGCCGAGCAGGCGTGGG
TGCGGGCTGCCATTCTTCCCTCGGCTGCCGGGGCCACGGCCGCAGTCGCTTACCTACTACCACAAGCTATTCCACATCCG
ATAATCGGCGCAATCGGTACCGTAGCCGCCTACCTGCTACGGCTCATCGCCGTCGGCGCAATCGTCATTCATCTGGTGAA
CACCACGACACCGAGCGAATTCACCGCTGCCCTGCGCGCTACCCACATTCCCCGTGCGATCACGGTCTCCGGTTCCGTCA
TGCTGCGATTCCTGCCAACCATCGTTGGTGAAGCACGTGCCGTCAGCGACGCCATGCGATTGCGTGGGATCGGCGGGACA
TACGGAATGCTGCGCCATCCCGTTTGCACCATCGAGTACTTCACCGTTCCCCTTATAGCGTCGAGCCTTCGTGTCGCAGA
AGATCTTTCAGCAACCGCGCTACTGCGTGGTCTTGGCTCTGCAGCACGGCCGACAACGATGTACCCCCCGCGTTTCGGTA
AAGCGGATGCGCTAATCGGTTGCATCGTCAGCGCACTGACCGTCACCACCGTGCTGTGGCCGGTGAAACCGTGA

Upstream 100 bases:

>100_bases
TGCTAATCGCATTCGACCTGTCCACGGTGGTATTCGGGCTGATCGGCGGACTGCTCGGAGTAAGGTTGCTGCGCAAGCAT
TTTCAGAGGGCCGGCCTAGC

Downstream 100 bases:

>100_bases
TTCGCATCGACGGCGTACGTTGGCAATACGCCGGAACCGACGCTGCCGTTTTGGACGGAGTGGACTTGCACATACGCCGT
GGCGAGACCGTTCTGCTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTRTTTRVTQLDPRTKTVLVLASSIAVMAPGGEVFVPAAVIVGMLLAVAEQAWVRAAILPSAAGATAAVAYLLPQAIPHP
IIGAIGTVAAYLLRLIAVGAIVIHLVNTTTPSEFTAALRATHIPRAITVSGSVMLRFLPTIVGEARAVSDAMRLRGIGGT
YGMLRHPVCTIEYFTVPLIASSLRVAEDLSATALLRGLGSAARPTTMYPPRFGKADALIGCIVSALTVTTVLWPVKP

Sequences:

>Translated_237_residues
MTRTTTRVTQLDPRTKTVLVLASSIAVMAPGGEVFVPAAVIVGMLLAVAEQAWVRAAILPSAAGATAAVAYLLPQAIPHP
IIGAIGTVAAYLLRLIAVGAIVIHLVNTTTPSEFTAALRATHIPRAITVSGSVMLRFLPTIVGEARAVSDAMRLRGIGGT
YGMLRHPVCTIEYFTVPLIASSLRVAEDLSATALLRGLGSAARPTTMYPPRFGKADALIGCIVSALTVTTVLWPVKP
>Mature_236_residues
TRTTTRVTQLDPRTKTVLVLASSIAVMAPGGEVFVPAAVIVGMLLAVAEQAWVRAAILPSAAGATAAVAYLLPQAIPHPI
IGAIGTVAAYLLRLIAVGAIVIHLVNTTTPSEFTAALRATHIPRAITVSGSVMLRFLPTIVGEARAVSDAMRLRGIGGTY
GMLRHPVCTIEYFTVPLIASSLRVAEDLSATALLRGLGSAARPTTMYPPRFGKADALIGCIVSALTVTTVLWPVKP

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24684; Mature: 24552

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTTTRVTQLDPRTKTVLVLASSIAVMAPGGEVFVPAAVIVGMLLAVAEQAWVRAAILP
CCCCCCHHEECCCCHHEEEEEECCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCC
SAAGATAAVAYLLPQAIPHPIIGAIGTVAAYLLRLIAVGAIVIHLVNTTTPSEFTAALRA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
THIPRAITVSGSVMLRFLPTIVGEARAVSDAMRLRGIGGTYGMLRHPVCTIEYFTVPLIA
HCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEHHHHHHHHH
SSLRVAEDLSATALLRGLGSAARPTTMYPPRFGKADALIGCIVSALTVTTVLWPVKP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TRTTTRVTQLDPRTKTVLVLASSIAVMAPGGEVFVPAAVIVGMLLAVAEQAWVRAAILP
CCCCCHHEECCCCHHEEEEEECCCEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCC
SAAGATAAVAYLLPQAIPHPIIGAIGTVAAYLLRLIAVGAIVIHLVNTTTPSEFTAALRA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
THIPRAITVSGSVMLRFLPTIVGEARAVSDAMRLRGIGGTYGMLRHPVCTIEYFTVPLIA
HCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEHHHHHHHHH
SSLRVAEDLSATALLRGLGSAARPTTMYPPRFGKADALIGCIVSALTVTTVLWPVKP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA