| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is fecB2
Identifier: 41409808
GI number: 41409808
Start: 4126874
End: 4127881
Strand: Reverse
Name: fecB2
Synonym: MAP3710c
Alternate gene names: NA
Gene position: 4127881-4126874 (Counterclockwise)
Preceding gene: 41409809
Following gene: 41409807
Centisome position: 85.47
GC content: 68.25
Gene sequence:
>1008_bases ATGCGACAGGGATGGAATCGACGGGGATTCTTGCAGCTCGCAGGGGCAGCCGGCGTGGCCGCGACGGCCGGTGCGGCCGG GCTGTCGGCGGGGTGCTCGGCACACCAGCCGCCCCCGGGGGGCGCCGGGCCGGGATCGGTGACCGTCACCCACCTGTTCG GCCAGACCGTCGTCAAGGAACCGCCCAAGCGCGTCGTCAGCGCCGGCTACACCGAGCAGGACGACCTGCTCGCCGTGGGC GTGGTGCCGATCGCGGTGACCAACTGGTTCGGTGACCAGCCGTTCGCGGTGTGGCCTTGGGCCGCAGACAAACTCGGCGG GGCCCAGCCCACCGTGCTGAACCTGGACAACGGCATCCCGGTCGACCAGATCGCCGGTCTCAAACCGGATCTGATCGTGG CCATCAACGCGGGGCTGGACGCCGACACCTACCAGAAGCTGTCCGCGATCGCCCCGACCGTGGCGCAATCGGACGGGGAC GCCTTCTTCGAACCGTGGAAGGAGCAGGCCGCCGCCGTCGGCCAGGCGGTGTTCGCGGCCGAGAAAATGAAGTCGTTGGT CGCCGGCGTCGACCAGAAGTTCACCGATATCGGCAAGAAGAACCCGCAATGGACCGGCAAGAAGGCGCTGCTGATGCACG GGGCGCTGTGGCAGGGCACCGTGGTGGCCACCATGGCCGGCTGGCGCACCGACTTCCTCAACCAGATGGGGCTGGTCATC GCCGACAGCATCAAACCGTTCGGCACCGATCAGCGCGCCGTCATCCCGCGTGACCACATCAAATCGGTGCTGGAATCCGC CGACGTGGTGATCTGGACGACCCAGAACCCCGACGACCAAAAGGCGCTGCTGGCCGACCCCGAGGTGGCCGGGTCGCTGA CCACCGCACAGAACCGGCACATCTTCACCACCAAGGACCAGGCGGGTGCGATCGCCTTCGCGTCCCCGCTGAGCTACCCG GTGATCGCCGACCAGCTGCCCCCGCAGCTGACCAAGATCCTGGGCTAG
Upstream 100 bases:
>100_bases CCGGGCACTGGATTTCATGGACGCCGGGATGCCGCTGGACTGAGCGGCCTCACCAGCGCGGCGATGGGTGTGTGGGGGCG GAACGCGATACTCTCACGCG
Downstream 100 bases:
>100_bases TCGCGGCTGTTTGAGCGTTTGCTAAGGCAGCTCTGGCAGTGCTCGAAAATCCGTCGGCCACCCCTCGCACGGGCCGCGAT CCCGGGGTTACCGTCGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; ABC-Type Fe3+-Siderophores Transport System; Transport System Permease Protein; ABC-Transport System; Periplasmic Iron-Transport Lipoprotein; Periplasmic IRON-Transport Lipoprotein; Iron ABC Transporter Permease; Lipoprotein
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MRQGWNRRGFLQLAGAAGVAATAGAAGLSAGCSAHQPPPGGAGPGSVTVTHLFGQTVVKEPPKRVVSAGYTEQDDLLAVG VVPIAVTNWFGDQPFAVWPWAADKLGGAQPTVLNLDNGIPVDQIAGLKPDLIVAINAGLDADTYQKLSAIAPTVAQSDGD AFFEPWKEQAAAVGQAVFAAEKMKSLVAGVDQKFTDIGKKNPQWTGKKALLMHGALWQGTVVATMAGWRTDFLNQMGLVI ADSIKPFGTDQRAVIPRDHIKSVLESADVVIWTTQNPDDQKALLADPEVAGSLTTAQNRHIFTTKDQAGAIAFASPLSYP VIADQLPPQLTKILG
Sequences:
>Translated_335_residues MRQGWNRRGFLQLAGAAGVAATAGAAGLSAGCSAHQPPPGGAGPGSVTVTHLFGQTVVKEPPKRVVSAGYTEQDDLLAVG VVPIAVTNWFGDQPFAVWPWAADKLGGAQPTVLNLDNGIPVDQIAGLKPDLIVAINAGLDADTYQKLSAIAPTVAQSDGD AFFEPWKEQAAAVGQAVFAAEKMKSLVAGVDQKFTDIGKKNPQWTGKKALLMHGALWQGTVVATMAGWRTDFLNQMGLVI ADSIKPFGTDQRAVIPRDHIKSVLESADVVIWTTQNPDDQKALLADPEVAGSLTTAQNRHIFTTKDQAGAIAFASPLSYP VIADQLPPQLTKILG >Mature_335_residues MRQGWNRRGFLQLAGAAGVAATAGAAGLSAGCSAHQPPPGGAGPGSVTVTHLFGQTVVKEPPKRVVSAGYTEQDDLLAVG VVPIAVTNWFGDQPFAVWPWAADKLGGAQPTVLNLDNGIPVDQIAGLKPDLIVAINAGLDADTYQKLSAIAPTVAQSDGD AFFEPWKEQAAAVGQAVFAAEKMKSLVAGVDQKFTDIGKKNPQWTGKKALLMHGALWQGTVVATMAGWRTDFLNQMGLVI ADSIKPFGTDQRAVIPRDHIKSVLESADVVIWTTQNPDDQKALLADPEVAGSLTTAQNRHIFTTKDQAGAIAFASPLSYP VIADQLPPQLTKILG
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35172; Mature: 35172
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQGWNRRGFLQLAGAAGVAATAGAAGLSAGCSAHQPPPGGAGPGSVTVTHLFGQTVVKE CCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCC PPKRVVSAGYTEQDDLLAVGVVPIAVTNWFGDQPFAVWPWAADKLGGAQPTVLNLDNGIP CHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCHHHCCCCCCEEEECCCCCC VDQIAGLKPDLIVAINAGLDADTYQKLSAIAPTVAQSDGDAFFEPWKEQAAAVGQAVFAA HHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH EKMKSLVAGVDQKFTDIGKKNPQWTGKKALLMHGALWQGTVVATMAGWRTDFLNQMGLVI HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCEEE ADSIKPFGTDQRAVIPRDHIKSVLESADVVIWTTQNPDDQKALLADPEVAGSLTTAQNRH ECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEECCHHCCCEECCCCCE IFTTKDQAGAIAFASPLSYPVIADQLPPQLTKILG EEEECCCCCEEEEECCCCCCHHHHCCCHHHHHHCC >Mature Secondary Structure MRQGWNRRGFLQLAGAAGVAATAGAAGLSAGCSAHQPPPGGAGPGSVTVTHLFGQTVVKE CCCCCCCCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCC PPKRVVSAGYTEQDDLLAVGVVPIAVTNWFGDQPFAVWPWAADKLGGAQPTVLNLDNGIP CHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCEEECCCHHHCCCCCCEEEECCCCCC VDQIAGLKPDLIVAINAGLDADTYQKLSAIAPTVAQSDGDAFFEPWKEQAAAVGQAVFAA HHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHH EKMKSLVAGVDQKFTDIGKKNPQWTGKKALLMHGALWQGTVVATMAGWRTDFLNQMGLVI HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHCCEEE ADSIKPFGTDQRAVIPRDHIKSVLESADVVIWTTQNPDDQKALLADPEVAGSLTTAQNRH ECCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCEEEECCHHCCCEECCCCCE IFTTKDQAGAIAFASPLSYPVIADQLPPQLTKILG EEEECCCCCEEEEECCCCCCHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA