| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409803
Identifier: 41409803
GI number: 41409803
Start: 4121363
End: 4122136
Strand: Reverse
Name: 41409803
Synonym: MAP3705c
Alternate gene names: NA
Gene position: 4122136-4121363 (Counterclockwise)
Preceding gene: 41409804
Following gene: 41409802
Centisome position: 85.35
GC content: 74.94
Gene sequence:
>774_bases ATGGCACTGATCCTGGTGGCGCACGGCACCCGCCGGCCGGGCGGTGTGGCGATGATCGAAGGCCTTGCGGCGCAAGTGAG TACGCTCGTCGGCGGCCGCGTCGAGGTGGCGTTCGTGGACGTGGTGGGGCCGACCCCCAGCGAGGTCCTGGCCGCGGCCC GGGCGGCCGGCCGGCCCGCCATCGTGGTGCCGGCCTTCCTGTCGCGCGGTTATCACGTCCGCGCCGATCTGCCAGCCCAC GTCGCGCTCAGCGGACACCCGAACGTCACAGTCACCCCGGCGCTGGGGCCCAGCGGCCAGATCGCCCGGATCGTCGGCGA TCAACTGCTCGAATGTGGTTGGCGCCCAAACGATTCAGTAGTGCTGGCGGCGGCGGGCACCTCCGACGACAAGGCGCGGG CCGACCTGCACACCGCGGCGACGTGGTTGTCGGCGCTGACCGGATCACGCGTCACCCTCGGGTTCGCCGCCACCGGGGAC CCGCCGCTGGGCGAGGCGGTCGCCCGGGCCCGGCCGCATGCCCGCCGCAACGGCGGGCGCGTGGTCGTCGCCTCCTACCT GCTGGCCGACGGGCTGTTCCAACAGCGGCTGCACGGCTGCGGCGCCGATCTGGTCAGCGCGCCGCTGAGCACACATCCGG GGCTGGCGCGGCTGATCGCGAACCGATTCCGCCGCGCCCTGCCGCCGGTGCTCGCCGCCACCGCCCGGCACGCGTCCCGC CGAACGGGTCCGCACCAGCGCGCCCACGCGCCCGCCACGCGGCCGGTTCCTTGA
Upstream 100 bases:
>100_bases CCGTGCTGCGGCTGCGAACGGCGCTGGGCGACAAGAACATCATCGCGACGGTGGTCAAGCGCGGCTACCGGCTGGCGATC GACACCCCGGACGGATCGGC
Downstream 100 bases:
>100_bases TCTTTGCCCCACGACCGGCGATCCTGACACCATGCCCCGCCGCGAAGAGCCGTCGCACGGGCTTCTCGACCCCGTGGCCA AGATGCTGCGGTTGCCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Uroporphyrin-III C-Methyltransferase; Chalcone/Stilbene Synthase; Ferrochelatase; LOW QUALITY PROTEIN Secreted Protein; CbiX Family Protein; Cobalamin Biosynthesis Protein; Chalcone/Stilbene Synthase Family Protein
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MALILVAHGTRRPGGVAMIEGLAAQVSTLVGGRVEVAFVDVVGPTPSEVLAAARAAGRPAIVVPAFLSRGYHVRADLPAH VALSGHPNVTVTPALGPSGQIARIVGDQLLECGWRPNDSVVLAAAGTSDDKARADLHTAATWLSALTGSRVTLGFAATGD PPLGEAVARARPHARRNGGRVVVASYLLADGLFQQRLHGCGADLVSAPLSTHPGLARLIANRFRRALPPVLAATARHASR RTGPHQRAHAPATRPVP
Sequences:
>Translated_257_residues MALILVAHGTRRPGGVAMIEGLAAQVSTLVGGRVEVAFVDVVGPTPSEVLAAARAAGRPAIVVPAFLSRGYHVRADLPAH VALSGHPNVTVTPALGPSGQIARIVGDQLLECGWRPNDSVVLAAAGTSDDKARADLHTAATWLSALTGSRVTLGFAATGD PPLGEAVARARPHARRNGGRVVVASYLLADGLFQQRLHGCGADLVSAPLSTHPGLARLIANRFRRALPPVLAATARHASR RTGPHQRAHAPATRPVP >Mature_256_residues ALILVAHGTRRPGGVAMIEGLAAQVSTLVGGRVEVAFVDVVGPTPSEVLAAARAAGRPAIVVPAFLSRGYHVRADLPAHV ALSGHPNVTVTPALGPSGQIARIVGDQLLECGWRPNDSVVLAAAGTSDDKARADLHTAATWLSALTGSRVTLGFAATGDP PLGEAVARARPHARRNGGRVVVASYLLADGLFQQRLHGCGADLVSAPLSTHPGLARLIANRFRRALPPVLAATARHASRR TGPHQRAHAPATRPVP
Specific function: Unknown
COG id: COG2138
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26493; Mature: 26362
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALILVAHGTRRPGGVAMIEGLAAQVSTLVGGRVEVAFVDVVGPTPSEVLAAARAAGRPA CEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHCCCCE IVVPAFLSRGYHVRADLPAHVALSGHPNVTVTPALGPSGQIARIVGDQLLECGWRPNDSV EEEEHHHHCCEEEEECCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCE VLAAAGTSDDKARADLHTAATWLSALTGSRVTLGFAATGDPPLGEAVARARPHARRNGGR EEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCHHCCCCE VVVASYLLADGLFQQRLHGCGADLVSAPLSTHPGLARLIANRFRRALPPVLAATARHASR EEEHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH RTGPHQRAHAPATRPVP CCCCCHHCCCCCCCCCC >Mature Secondary Structure ALILVAHGTRRPGGVAMIEGLAAQVSTLVGGRVEVAFVDVVGPTPSEVLAAARAAGRPA EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHHHHHHHCCCCE IVVPAFLSRGYHVRADLPAHVALSGHPNVTVTPALGPSGQIARIVGDQLLECGWRPNDSV EEEEHHHHCCEEEEECCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCE VLAAAGTSDDKARADLHTAATWLSALTGSRVTLGFAATGDPPLGEAVARARPHARRNGGR EEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCHHCCCCE VVVASYLLADGLFQQRLHGCGADLVSAPLSTHPGLARLIANRFRRALPPVLAATARHASR EEEHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH RTGPHQRAHAPATRPVP CCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA